Camel associated porprismacovirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus

Average proteome isoelectric point is 7.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A1ENV3|A0A0A1ENV3_9VIRU Uncharacterized protein OS=Camel associated porprismacovirus 1 OX=2170105 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.01SQSITVSIVEE11 pKa = 4.58TYY13 pKa = 10.93DD14 pKa = 3.91LSTTEE19 pKa = 4.0NRR21 pKa = 11.84MGLIAIKK28 pKa = 8.7TPSMTAVNKK37 pKa = 10.05RR38 pKa = 11.84YY39 pKa = 9.51PGFIRR44 pKa = 11.84NFKK47 pKa = 9.35FLHH50 pKa = 5.86VNSCDD55 pKa = 3.62VVLSCASTLPTDD67 pKa = 4.08PLQIGTTAGKK77 pKa = 9.78VAPQDD82 pKa = 3.32MFNPLLYY89 pKa = 10.4KK90 pKa = 10.52AVSNDD95 pKa = 2.65SWNGLLSRR103 pKa = 11.84IYY105 pKa = 10.41SPTGASVSLNDD116 pKa = 4.69DD117 pKa = 3.18VRR119 pKa = 11.84HH120 pKa = 5.79FADD123 pKa = 4.55AFPDD127 pKa = 3.57ATSTEE132 pKa = 4.45SVRR135 pKa = 11.84AYY137 pKa = 10.75YY138 pKa = 11.29AMLADD143 pKa = 4.05PSFKK147 pKa = 10.1KK148 pKa = 10.69AHH150 pKa = 5.72IQAGLSMRR158 pKa = 11.84GLRR161 pKa = 11.84PLVYY165 pKa = 10.02HH166 pKa = 6.84LLSGSGTNTEE176 pKa = 4.18LTGAGQPTAVGQAYY190 pKa = 9.69KK191 pKa = 10.88NYY193 pKa = 10.08VDD195 pKa = 5.29DD196 pKa = 6.0SGDD199 pKa = 3.31AYY201 pKa = 10.95QRR203 pKa = 11.84ASNNLYY209 pKa = 10.78SGTTLFKK216 pKa = 10.71GRR218 pKa = 11.84PVPMPSVQTTPAVVHH233 pKa = 6.49PSDD236 pKa = 3.71GTVTQIDD243 pKa = 4.41YY244 pKa = 11.15NVVLGGIPSTYY255 pKa = 9.05VCAIVVPPHH264 pKa = 6.31SLNTTYY270 pKa = 10.78FRR272 pKa = 11.84MTVKK276 pKa = 10.31WSVTFHH282 pKa = 5.79TVASEE287 pKa = 3.84MSKK290 pKa = 11.28ALMPGMSDD298 pKa = 3.5LGRR301 pKa = 11.84YY302 pKa = 8.77AYY304 pKa = 7.75YY305 pKa = 10.33TSEE308 pKa = 4.13TSKK311 pKa = 11.1LEE313 pKa = 3.85PVPIEE318 pKa = 4.5DD319 pKa = 3.99VSDD322 pKa = 3.56TAVTGDD328 pKa = 3.48TVDD331 pKa = 3.54ADD333 pKa = 4.26GVSLDD338 pKa = 4.39LVMEE342 pKa = 4.57KK343 pKa = 10.8

Molecular weight: 37.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A1EJ70|A0A0A1EJ70_9VIRU Putative replicase protein OS=Camel associated porprismacovirus 1 OX=2170105 GN=rep PE=4 SV=1
MM1 pKa = 7.27YY2 pKa = 9.05PILPLLVILSMPMVFLSILSWRR24 pKa = 11.84NDD26 pKa = 3.08MASYY30 pKa = 9.97RR31 pKa = 11.84QYY33 pKa = 11.09RR34 pKa = 11.84HH35 pKa = 5.42QSSSNFGRR43 pKa = 11.84PSSMRR48 pKa = 11.84FDD50 pKa = 4.48LDD52 pKa = 2.9PRR54 pKa = 11.84TRR56 pKa = 11.84YY57 pKa = 9.38EE58 pKa = 3.79LSKK61 pKa = 11.27VPFIGDD67 pKa = 3.63AFRR70 pKa = 11.84YY71 pKa = 8.48MDD73 pKa = 3.13QTKK76 pKa = 10.65YY77 pKa = 10.85YY78 pKa = 10.29NDD80 pKa = 3.51YY81 pKa = 10.21LASRR85 pKa = 11.84GMTWNDD91 pKa = 2.63VKK93 pKa = 11.36YY94 pKa = 9.47PALLSGSGAYY104 pKa = 9.31GVAASGYY111 pKa = 8.17RR112 pKa = 11.84VSKK115 pKa = 11.04NFLKK119 pKa = 10.81LYY121 pKa = 10.13RR122 pKa = 4.74

Molecular weight: 14.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

732

122

343

244.0

27.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.557 ± 0.808

1.23 ± 0.47

6.148 ± 0.163

4.372 ± 1.766

3.552 ± 0.417

6.694 ± 0.242

2.049 ± 0.318

4.781 ± 1.082

5.601 ± 1.42

7.923 ± 0.687

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.279 ± 0.708

3.689 ± 0.323

4.918 ± 1.107

2.732 ± 0.121

6.284 ± 1.678

8.743 ± 1.599

7.65 ± 1.518

7.104 ± 1.522

1.776 ± 0.812

4.918 ± 1.274
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski