Streptococcus satellite phage Javan603

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZWH4|A0A4D5ZWH4_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan603 OX=2558772 GN=JavanS603_0013 PE=4 SV=1
MM1 pKa = 7.28SVIGNFLKK9 pKa = 9.79EE10 pKa = 3.94TRR12 pKa = 11.84KK13 pKa = 10.6DD14 pKa = 3.43KK15 pKa = 10.81NIKK18 pKa = 9.89VVTLAKK24 pKa = 10.06QVGISQPYY32 pKa = 8.74ISNIEE37 pKa = 3.82NGKK40 pKa = 10.26RR41 pKa = 11.84GVTKK45 pKa = 10.3EE46 pKa = 4.13LFFKK50 pKa = 10.45IIYY53 pKa = 10.05AIAEE57 pKa = 4.24LSPITRR63 pKa = 11.84NVYY66 pKa = 10.58DD67 pKa = 3.8EE68 pKa = 5.41LGLSEE73 pKa = 4.34EE74 pKa = 4.4KK75 pKa = 10.59KK76 pKa = 10.88EE77 pKa = 4.74EE78 pKa = 3.85IDD80 pKa = 3.96IDD82 pKa = 3.87DD83 pKa = 4.04TLGEE87 pKa = 4.32FWDD90 pKa = 4.73EE91 pKa = 4.25YY92 pKa = 11.37YY93 pKa = 11.24DD94 pKa = 6.22DD95 pKa = 5.14IKK97 pKa = 11.26QDD99 pKa = 3.72LNSYY103 pKa = 9.68MDD105 pKa = 5.28DD106 pKa = 3.72DD107 pKa = 4.56EE108 pKa = 6.5KK109 pKa = 11.27PILTLEE115 pKa = 4.5DD116 pKa = 3.57FLDD119 pKa = 4.6YY120 pKa = 10.29VQSWSFEE127 pKa = 4.09DD128 pKa = 3.48MLTISGYY135 pKa = 11.1SDD137 pKa = 3.76FLDD140 pKa = 3.39SKK142 pKa = 11.17YY143 pKa = 11.13GVDD146 pKa = 3.33NYY148 pKa = 10.35MGYY151 pKa = 11.24GDD153 pKa = 3.94YY154 pKa = 10.6QDD156 pKa = 3.79YY157 pKa = 11.33SSYY160 pKa = 11.22TNPEE164 pKa = 3.93YY165 pKa = 10.69VQEE168 pKa = 4.05LVFDD172 pKa = 3.51YY173 pKa = 9.62WYY175 pKa = 11.06QSILSDD181 pKa = 3.57FLEE184 pKa = 4.53LFEE187 pKa = 7.0IDD189 pKa = 4.45LSPIEE194 pKa = 4.44TKK196 pKa = 10.31IEE198 pKa = 4.24TNWALLNEE206 pKa = 4.22LDD208 pKa = 3.72KK209 pKa = 11.67QEE211 pKa = 4.12FEE213 pKa = 4.38IYY215 pKa = 9.34STVKK219 pKa = 10.27SLRR222 pKa = 11.84SKK224 pKa = 9.71SGYY227 pKa = 7.37FARR230 pKa = 11.84YY231 pKa = 8.59HH232 pKa = 5.98LQDD235 pKa = 3.43EE236 pKa = 4.66NKK238 pKa = 10.31EE239 pKa = 4.1KK240 pKa = 10.94LVDD243 pKa = 4.48LNILYY248 pKa = 9.96DD249 pKa = 3.44QEE251 pKa = 4.79SIYY254 pKa = 11.37NVTFDD259 pKa = 4.24GKK261 pKa = 9.65PLSEE265 pKa = 4.21EE266 pKa = 4.68DD267 pKa = 4.1IIALRR272 pKa = 11.84NTLNGIRR279 pKa = 11.84YY280 pKa = 9.43SKK282 pKa = 11.19

Molecular weight: 33.18 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZRS1|A0A4D5ZRS1_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan603 OX=2558772 GN=JavanS603_0012 PE=4 SV=1
MM1 pKa = 7.78KK2 pKa = 10.26INEE5 pKa = 4.22IKK7 pKa = 10.67KK8 pKa = 9.76KK9 pKa = 10.54DD10 pKa = 3.3GSTVYY15 pKa = 10.36RR16 pKa = 11.84ANIYY20 pKa = 10.62LGVDD24 pKa = 3.95VITGKK29 pKa = 10.74KK30 pKa = 7.55VTTKK34 pKa = 9.32VTARR38 pKa = 11.84TKK40 pKa = 10.91KK41 pKa = 9.48EE42 pKa = 4.24LKK44 pKa = 9.67TKK46 pKa = 10.1AQQAQFDD53 pKa = 4.54FKK55 pKa = 11.59ANGSTRR61 pKa = 11.84YY62 pKa = 9.72KK63 pKa = 9.99EE64 pKa = 4.21VAIEE68 pKa = 4.25TYY70 pKa = 10.63EE71 pKa = 3.95EE72 pKa = 4.45LAISWWDD79 pKa = 3.38SYY81 pKa = 11.84KK82 pKa = 10.19NTVKK86 pKa = 10.95ANTKK90 pKa = 9.64RR91 pKa = 11.84AQKK94 pKa = 10.81GLLNNHH100 pKa = 5.72VLPLFGEE107 pKa = 4.67FKK109 pKa = 10.56LDD111 pKa = 3.59KK112 pKa = 10.06LTTPLIQSTMNKK124 pKa = 9.46LANSTNTGEE133 pKa = 4.11AGAYY137 pKa = 8.96LHH139 pKa = 6.56YY140 pKa = 11.05DD141 pKa = 4.09KK142 pKa = 11.05IHH144 pKa = 6.58ALNKK148 pKa = 10.18RR149 pKa = 11.84ILQYY153 pKa = 11.17GVVLQVIPTNPANNVVLPRR172 pKa = 11.84NTQKK176 pKa = 11.1DD177 pKa = 3.22KK178 pKa = 10.56KK179 pKa = 10.89AKK181 pKa = 9.81VKK183 pKa = 10.6HH184 pKa = 5.76FNNDD188 pKa = 2.8EE189 pKa = 4.08LKK191 pKa = 10.82QFLTYY196 pKa = 10.53LDD198 pKa = 4.07SLDD201 pKa = 3.34NSKK204 pKa = 11.04YY205 pKa = 10.38KK206 pKa = 10.64NYY208 pKa = 10.65YY209 pKa = 10.47DD210 pKa = 3.03ITLYY214 pKa = 10.98KK215 pKa = 10.3FLLATGCRR223 pKa = 11.84INEE226 pKa = 4.0ALALSWSDD234 pKa = 2.86IDD236 pKa = 4.49LDD238 pKa = 3.79NSVVHH243 pKa = 5.57ITKK246 pKa = 9.23TLNYY250 pKa = 9.33EE251 pKa = 4.08MKK253 pKa = 10.78LNSPKK258 pKa = 10.55SKK260 pKa = 10.22SGYY263 pKa = 9.62RR264 pKa = 11.84DD265 pKa = 2.83IDD267 pKa = 3.15IDD269 pKa = 3.87KK270 pKa = 9.04QTVTMMKK277 pKa = 9.91RR278 pKa = 11.84YY279 pKa = 7.4QHH281 pKa = 6.34KK282 pKa = 8.59QTQEE286 pKa = 3.08AWKK289 pKa = 10.12LGRR292 pKa = 11.84TEE294 pKa = 4.07TVVFSDD300 pKa = 6.21FIHH303 pKa = 7.08EE304 pKa = 4.36YY305 pKa = 9.57PNSRR309 pKa = 11.84TLQSRR314 pKa = 11.84LGTHH318 pKa = 6.83FKK320 pKa = 10.69RR321 pKa = 11.84AGVTNIGFHH330 pKa = 6.07GFRR333 pKa = 11.84HH334 pKa = 4.87THH336 pKa = 6.58ASLLLNSGIPYY347 pKa = 10.0KK348 pKa = 10.34EE349 pKa = 3.8LQHH352 pKa = 6.88RR353 pKa = 11.84LGHH356 pKa = 6.17SKK358 pKa = 11.08LSMTMDD364 pKa = 3.56IYY366 pKa = 11.68SHH368 pKa = 6.98LSKK371 pKa = 11.0EE372 pKa = 4.25NAKK375 pKa = 10.37KK376 pKa = 10.27AVSFYY381 pKa = 10.95EE382 pKa = 4.17VALKK386 pKa = 10.72SII388 pKa = 4.28

Molecular weight: 44.5 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14

0

14

2284

61

500

163.1

18.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.166 ± 0.5

0.482 ± 0.124

6.217 ± 0.641

7.399 ± 0.804

3.984 ± 0.389

5.342 ± 0.387

1.532 ± 0.449

6.655 ± 0.59

8.932 ± 0.732

9.632 ± 0.578

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.189 ± 0.321

7.005 ± 0.483

3.284 ± 0.81

3.24 ± 0.347

4.028 ± 0.348

6.042 ± 0.729

6.743 ± 0.725

5.911 ± 0.345

1.051 ± 0.229

5.166 ± 0.498
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski