Bat betaherpesvirus B7D8

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; unclassified Betaherpesvirinae

Average proteome isoelectric point is 7.09

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 189 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I3VQ95|I3VQ95_9BETA B101.1 OS=Bat betaherpesvirus B7D8 OX=1195167 PE=4 SV=1
MM1 pKa = 7.34SGKK4 pKa = 10.43SSVCFASGMEE14 pKa = 4.63VILDD18 pKa = 4.31CNDD21 pKa = 3.16GDD23 pKa = 3.83QTVFFALTEE32 pKa = 4.41DD33 pKa = 3.27SSPRR37 pKa = 11.84VISRR41 pKa = 11.84NNLPSNRR48 pKa = 11.84RR49 pKa = 11.84FIVLAEE55 pKa = 4.28EE56 pKa = 4.75DD57 pKa = 3.63PCGNDD62 pKa = 3.14MSQGEE67 pKa = 4.27PNEE70 pKa = 4.14PFVEE74 pKa = 4.41DD75 pKa = 3.06VDD77 pKa = 5.12GEE79 pKa = 4.72SEE81 pKa = 4.55CFNALDD87 pKa = 4.18SYY89 pKa = 11.72NALFDD94 pKa = 3.83GQIEE98 pKa = 4.77GFFDD102 pKa = 5.23DD103 pKa = 4.71YY104 pKa = 11.97LNLEE108 pKa = 4.28PDD110 pKa = 3.29ACVTRR115 pKa = 11.84LDD117 pKa = 3.57VEE119 pKa = 4.5MYY121 pKa = 10.91DD122 pKa = 4.85LLTEE126 pKa = 4.45CGEE129 pKa = 4.27DD130 pKa = 3.41ACVSACDD137 pKa = 3.12RR138 pKa = 11.84WADD141 pKa = 4.63DD142 pKa = 4.2RR143 pKa = 11.84ADD145 pKa = 3.42SCGFQLL151 pKa = 5.3

Molecular weight: 16.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I3VQ62|I3VQ62_9BETA B69.2 OS=Bat betaherpesvirus B7D8 OX=1195167 PE=4 SV=1
MM1 pKa = 7.84RR2 pKa = 11.84ATSRR6 pKa = 11.84RR7 pKa = 11.84SKK9 pKa = 10.43PYY11 pKa = 10.93NKK13 pKa = 9.95YY14 pKa = 8.71CTPAPLNKK22 pKa = 10.01SCFHH26 pKa = 6.24RR27 pKa = 11.84WLYY30 pKa = 11.17LFAFFFFGDD39 pKa = 4.14LEE41 pKa = 4.42RR42 pKa = 11.84MRR44 pKa = 11.84RR45 pKa = 11.84TRR47 pKa = 11.84AVCADD52 pKa = 3.74RR53 pKa = 11.84DD54 pKa = 4.33FISFFF59 pKa = 4.04

Molecular weight: 7.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

189

0

189

63743

50

2171

337.3

37.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.182 ± 0.146

2.832 ± 0.122

6.143 ± 0.127

5.196 ± 0.128

4.264 ± 0.1

6.266 ± 0.232

2.279 ± 0.074

5.072 ± 0.144

3.922 ± 0.122

8.556 ± 0.18

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.468 ± 0.076

4.048 ± 0.126

4.681 ± 0.16

2.505 ± 0.1

7.883 ± 0.185

7.8 ± 0.145

6.349 ± 0.22

7.717 ± 0.191

1.162 ± 0.059

3.674 ± 0.09
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski