Weissella soli

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Weissella

Average proteome isoelectric point is 6.25

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1537 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A288Q6M8|A0A288Q6M8_9LACO Molecular chaperone DnaJ OS=Weissella soli OX=155866 GN=DFP99_0717 PE=4 SV=1
MM1 pKa = 7.41KK2 pKa = 10.07KK3 pKa = 10.25VKK5 pKa = 10.22AVLSGTVAAAAATLVSTTASADD27 pKa = 3.56TYY29 pKa = 11.04DD30 pKa = 3.72YY31 pKa = 11.26TVVQGDD37 pKa = 4.44TLWHH41 pKa = 6.31LAAVTNDD48 pKa = 3.25TVEE51 pKa = 4.54NIAARR56 pKa = 11.84NAIDD60 pKa = 4.19NPNLIYY66 pKa = 9.92IDD68 pKa = 3.6QVVTLDD74 pKa = 3.54SAATTSVATSVATSSAAATVASDD97 pKa = 3.97TVDD100 pKa = 3.35SAALASSAAASLAAASSAATTEE122 pKa = 4.21SAALASSAAASLAAASSAATEE143 pKa = 4.26SAALASSVAASSAAEE158 pKa = 4.14SAALASSEE166 pKa = 4.12AASLAAASSAVAEE179 pKa = 4.56SVTEE183 pKa = 4.2SAALASSEE191 pKa = 4.13AASAAAEE198 pKa = 4.24SAALASSEE206 pKa = 4.08AASLATASSAATEE219 pKa = 4.26SAALASSEE227 pKa = 4.05AAASSAAASSAVASAAAASSAATSIANSVAASKK260 pKa = 10.25AASSAASVAAASSAAASVAAVEE282 pKa = 4.55AAQSASTEE290 pKa = 4.31EE291 pKa = 4.23VASTSSVSGSGSVYY305 pKa = 10.69DD306 pKa = 3.47QFIAAGGTDD315 pKa = 4.77LLWKK319 pKa = 10.37YY320 pKa = 10.36IVLPEE325 pKa = 4.58SGGNPNAVSPNGYY338 pKa = 9.51HH339 pKa = 7.51GLGQTMEE346 pKa = 3.81SWGYY350 pKa = 11.24GSVATQTAGLVNYY363 pKa = 9.6AVSRR367 pKa = 11.84YY368 pKa = 9.78GSIDD372 pKa = 3.12AAVTFRR378 pKa = 11.84QANGWWW384 pKa = 3.24

Molecular weight: 36.18 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A288QYD8|A0A288QYD8_9LACO Uncharacterized protein OS=Weissella soli OX=155866 GN=DFP99_1367 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.69QPKK8 pKa = 8.34KK9 pKa = 7.47RR10 pKa = 11.84HH11 pKa = 5.71RR12 pKa = 11.84EE13 pKa = 3.7RR14 pKa = 11.84VHH16 pKa = 6.23GFRR19 pKa = 11.84KK20 pKa = 10.04RR21 pKa = 11.84MSTSNGRR28 pKa = 11.84KK29 pKa = 8.01VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84QKK37 pKa = 10.39GRR39 pKa = 11.84KK40 pKa = 8.52VLSAA44 pKa = 4.05

Molecular weight: 5.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1537

0

1537

484907

32

1771

315.5

34.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.735 ± 0.079

0.113 ± 0.008

5.736 ± 0.058

5.702 ± 0.071

4.257 ± 0.047

6.946 ± 0.055

2.122 ± 0.032

6.902 ± 0.057

5.239 ± 0.066

9.735 ± 0.075

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.788 ± 0.03

4.295 ± 0.044

3.548 ± 0.031

4.445 ± 0.051

4.205 ± 0.051

5.318 ± 0.06

6.604 ± 0.052

7.779 ± 0.054

1.157 ± 0.026

3.374 ± 0.039
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski