Privet leaf blotch-associated virus
Average proteome isoelectric point is 7.35
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1E1JQ53|A0A1E1JQ53_9VIRU Movement protein OS=Privet leaf blotch-associated virus OX=1811408 GN=ORF2a PE=4 SV=1
MM1 pKa = 7.9 AYY3 pKa = 10.43 FSQAKK8 pKa = 9.49 SAVLEE13 pKa = 4.33 VVFPDD18 pKa = 3.78 GAKK21 pKa = 10.34 RR22 pKa = 11.84 LTQIDD27 pKa = 4.46 NILSLINGDD36 pKa = 3.55 KK37 pKa = 10.65 ACYY40 pKa = 9.98 LEE42 pKa = 4.58 TVALEE47 pKa = 4.04 MVPDD51 pKa = 3.92 KK52 pKa = 10.84 LRR54 pKa = 11.84 PAVCVGLSDD63 pKa = 5.0 LATIAQPLGDD73 pKa = 4.68 EE74 pKa = 5.03 LDD76 pKa = 4.89 DD77 pKa = 4.32 LTDD80 pKa = 3.66 MLPGYY85 pKa = 9.51 ILKK88 pKa = 10.16 QFLPASAPIRR98 pKa = 11.84 DD99 pKa = 4.07 FVVGPPQQTGWGYY112 pKa = 10.44 QSVGHH117 pKa = 5.87 FRR119 pKa = 11.84 SFTLKK124 pKa = 10.56 FGATVADD131 pKa = 4.26 LPDD134 pKa = 4.09 DD135 pKa = 4.01 VVFGCSVFSSEE146 pKa = 4.75 FEE148 pKa = 4.25 EE149 pKa = 4.61 KK150 pKa = 10.74 VKK152 pKa = 10.33 EE153 pKa = 4.09 LRR155 pKa = 11.84 LKK157 pKa = 10.47 VLNDD161 pKa = 2.88 VDD163 pKa = 4.53 SGVSRR168 pKa = 11.84 ILQGDD173 pKa = 4.05 FEE175 pKa = 7.05 ADD177 pKa = 3.33 LRR179 pKa = 11.84 HH180 pKa = 6.84 LIAEE184 pKa = 4.08 NRR186 pKa = 11.84 KK187 pKa = 8.29 GQEE190 pKa = 3.52 IPVPQVLSDD199 pKa = 3.95 EE200 pKa = 4.29 DD201 pKa = 3.94 TKK203 pKa = 10.95 ILRR206 pKa = 11.84 DD207 pKa = 3.55 HH208 pKa = 6.88 FPNVSLKK215 pKa = 8.94 FTKK218 pKa = 10.61 SVDD221 pKa = 3.65 GPHH224 pKa = 6.29 NMAAAHH230 pKa = 6.62 RR231 pKa = 11.84 NLEE234 pKa = 4.06 TWDD237 pKa = 4.09 LVHH240 pKa = 7.06 SFPTDD245 pKa = 3.29 TPVIDD250 pKa = 4.37 IGGNWFYY257 pKa = 10.86 HH258 pKa = 4.66 IRR260 pKa = 11.84 YY261 pKa = 9.26 GNTHH265 pKa = 5.3 VHH267 pKa = 5.57 SCCPILDD274 pKa = 3.92 PRR276 pKa = 11.84 DD277 pKa = 3.46 AARR280 pKa = 11.84 QTHH283 pKa = 5.84 RR284 pKa = 11.84 CVMLDD289 pKa = 3.31 SMMSNLKK296 pKa = 9.28 TKK298 pKa = 10.56 FSKK301 pKa = 10.4 IFSNLEE307 pKa = 3.87 EE308 pKa = 4.28 KK309 pKa = 10.62 VSRR312 pKa = 11.84 RR313 pKa = 11.84 DD314 pKa = 3.13 TRR316 pKa = 11.84 AMEE319 pKa = 3.71 NFYY322 pKa = 10.77 RR323 pKa = 11.84 KK324 pKa = 8.7 WAVHH328 pKa = 6.31 PKK330 pKa = 8.99 TLYY333 pKa = 10.66 DD334 pKa = 3.53 MYY336 pKa = 11.18 SRR338 pKa = 11.84 RR339 pKa = 11.84 HH340 pKa = 5.66 PNQGVYY346 pKa = 9.7 CHH348 pKa = 6.61 HH349 pKa = 6.95 AFGGKK354 pKa = 9.75 GYY356 pKa = 10.39 CAVQAKK362 pKa = 8.57 YY363 pKa = 11.49 AMMVHH368 pKa = 6.19 SGYY371 pKa = 11.14 DD372 pKa = 3.31 LALGDD377 pKa = 5.15 LINGLVAHH385 pKa = 6.79 GVLEE389 pKa = 3.97 LRR391 pKa = 11.84 GYY393 pKa = 9.65 MIADD397 pKa = 3.96 PSMLVCDD404 pKa = 4.08 KK405 pKa = 11.32 GYY407 pKa = 11.11 LPVLKK412 pKa = 10.68 CNWEE416 pKa = 3.99 KK417 pKa = 11.15 RR418 pKa = 11.84 NGDD421 pKa = 2.47 IWFSFKK427 pKa = 10.69 DD428 pKa = 3.95 DD429 pKa = 3.14 STMGYY434 pKa = 8.1 KK435 pKa = 10.41 HH436 pKa = 5.72 NWKK439 pKa = 10.3 LYY441 pKa = 8.19 SQYY444 pKa = 11.07 LQRR447 pKa = 11.84 TTIWSKK453 pKa = 10.99 GKK455 pKa = 8.63 QCLYY459 pKa = 10.58 VMEE462 pKa = 4.81 RR463 pKa = 11.84 DD464 pKa = 3.81 KK465 pKa = 11.41 YY466 pKa = 10.49 RR467 pKa = 11.84 HH468 pKa = 5.57 GTLQYY473 pKa = 10.43 TITGCDD479 pKa = 3.2 MQVPSGTYY487 pKa = 8.66 TLYY490 pKa = 10.63 HH491 pKa = 5.91 NAWFRR496 pKa = 11.84 DD497 pKa = 3.5 LFDD500 pKa = 4.82 KK501 pKa = 11.12 YY502 pKa = 10.37 IIQIPEE508 pKa = 3.82 IKK510 pKa = 10.23 LKK512 pKa = 10.32 SLKK515 pKa = 10.69 DD516 pKa = 3.53 PEE518 pKa = 4.42 GSKK521 pKa = 10.97 LSFRR525 pKa = 11.84 DD526 pKa = 3.34 LVVARR531 pKa = 11.84 DD532 pKa = 3.37 LVDD535 pKa = 4.19 RR536 pKa = 11.84 VTEE539 pKa = 3.69 ICLRR543 pKa = 11.84 GVKK546 pKa = 10.08 DD547 pKa = 4.81 FPPLQLDD554 pKa = 3.99 CKK556 pKa = 10.62 DD557 pKa = 4.13 EE558 pKa = 4.27 KK559 pKa = 10.97 QHH561 pKa = 6.69 AANLQLIQTHH571 pKa = 6.55 LLSHH575 pKa = 6.13 SQTVVLNGTTIVRR588 pKa = 11.84 ANPIPCEE595 pKa = 4.01 DD596 pKa = 4.58 FSPLSLSIYY605 pKa = 10.58 FEE607 pKa = 4.48 VILTKK612 pKa = 10.49 KK613 pKa = 10.59 KK614 pKa = 9.88 EE615 pKa = 3.84 VLMYY619 pKa = 10.51 GWMSNDD625 pKa = 3.03 CDD627 pKa = 4.58 AGFLSPAWYY636 pKa = 7.46 KK637 pKa = 9.87 TLGRR641 pKa = 11.84 FLKK644 pKa = 10.43 RR645 pKa = 11.84 VFLAPFSFLTRR656 pKa = 11.84 MFSALMPLFDD666 pKa = 4.11 DD667 pKa = 3.78 QKK669 pKa = 11.0 FIEE672 pKa = 4.27 SLIRR676 pKa = 11.84 KK677 pKa = 8.55 PEE679 pKa = 3.99 EE680 pKa = 3.71 KK681 pKa = 9.71 VTVLDD686 pKa = 3.69 RR687 pKa = 11.84 VRR689 pKa = 11.84 VSLEE693 pKa = 3.48 GEE695 pKa = 4.23 YY696 pKa = 9.43 RR697 pKa = 11.84 TDD699 pKa = 2.49 IYY701 pKa = 11.48 GNLVTLHH708 pKa = 6.88 SYY710 pKa = 10.83 RR711 pKa = 11.84 PVSKK715 pKa = 10.62 EE716 pKa = 3.23 FDD718 pKa = 3.39 DD719 pKa = 5.83 RR720 pKa = 11.84 EE721 pKa = 3.95 FDD723 pKa = 3.84 GDD725 pKa = 4.01 FFDD728 pKa = 5.17 TIEE731 pKa = 4.15 SLALLEE737 pKa = 4.22 EE738 pKa = 4.27 KK739 pKa = 10.54 VIKK742 pKa = 10.73 KK743 pKa = 9.23 EE744 pKa = 4.11 VEE746 pKa = 3.93 EE747 pKa = 4.19 TLPALDD753 pKa = 3.57 VFLLEE758 pKa = 4.51 EE759 pKa = 4.02 VDD761 pKa = 3.57 HH762 pKa = 6.58 FKK764 pKa = 11.09 VDD766 pKa = 3.1 GRR768 pKa = 11.84 TRR770 pKa = 11.84 PISPEE775 pKa = 3.83 DD776 pKa = 3.43 NVIQKK781 pKa = 10.11 SVAEE785 pKa = 4.17 YY786 pKa = 9.93 ISYY789 pKa = 11.15 NSTEE793 pKa = 3.87 YY794 pKa = 11.0 NRR796 pKa = 11.84 IVEE799 pKa = 4.57 EE800 pKa = 5.87 LRR802 pKa = 11.84 SAWNNVKK809 pKa = 10.3 VSGGAAGYY817 pKa = 11.11 SNDD820 pKa = 3.19 KK821 pKa = 9.78 CHH823 pKa = 6.46 YY824 pKa = 9.31 GIYY827 pKa = 9.57 SRR829 pKa = 11.84 KK830 pKa = 9.94 SGWLLPVQDD839 pKa = 5.4 LDD841 pKa = 4.06 HH842 pKa = 6.93 EE843 pKa = 5.08 CGFSEE848 pKa = 4.35 SLVWITVEE856 pKa = 3.62 NGLPVWEE863 pKa = 5.11 GDD865 pKa = 3.65 DD866 pKa = 4.0 LLVVNDD872 pKa = 3.37 NTRR875 pKa = 11.84 LVNNIKK881 pKa = 10.29 LARR884 pKa = 11.84 SVADD888 pKa = 3.92 NFDD891 pKa = 4.07 LLSIAKK897 pKa = 9.52 IPQFHH902 pKa = 7.25 IIDD905 pKa = 4.06 GVTGCGKK912 pKa = 6.74 TTEE915 pKa = 4.09 IVKK918 pKa = 9.3 TGNKK922 pKa = 8.29 PSVVILSVCKK932 pKa = 10.78 ANVEE936 pKa = 4.4 EE937 pKa = 4.86 IRR939 pKa = 11.84 RR940 pKa = 11.84 ALPGCKK946 pKa = 9.29 SSRR949 pKa = 11.84 VRR951 pKa = 11.84 TLDD954 pKa = 3.73 SYY956 pKa = 11.84 LLNPNVTCEE965 pKa = 3.92 TLFIDD970 pKa = 4.83 EE971 pKa = 5.39 FGLAHH976 pKa = 7.18 PGALPMAAVLTKK988 pKa = 10.21 CKK990 pKa = 10.31 RR991 pKa = 11.84 CILFGDD997 pKa = 4.28 TEE999 pKa = 4.48 QIPFCNRR1006 pKa = 11.84 IDD1008 pKa = 5.48 DD1009 pKa = 4.37 FVQEE1013 pKa = 4.25 YY1014 pKa = 10.82 KK1015 pKa = 10.8 SIEE1018 pKa = 4.67 DD1019 pKa = 3.85 IIQVTRR1025 pKa = 11.84 EE1026 pKa = 4.02 VRR1028 pKa = 11.84 TKK1030 pKa = 9.96 TYY1032 pKa = 10.49 RR1033 pKa = 11.84 CPQDD1037 pKa = 2.73 ITYY1040 pKa = 10.34 ILQDD1044 pKa = 3.08 VYY1046 pKa = 11.19 LRR1048 pKa = 11.84 KK1049 pKa = 10.16 KK1050 pKa = 10.25 IEE1052 pKa = 4.11 TVSQVEE1058 pKa = 3.68 EE1059 pKa = 4.39 SINIKK1064 pKa = 9.69 SIRR1067 pKa = 11.84 SEE1069 pKa = 3.83 NDD1071 pKa = 2.54 IPLPGCFPDD1080 pKa = 3.83 SVIYY1084 pKa = 10.39 ICMTQHH1090 pKa = 6.71 DD1091 pKa = 4.41 QALLSLRR1098 pKa = 11.84 WKK1100 pKa = 10.81 KK1101 pKa = 10.72 EE1102 pKa = 3.85 GIDD1105 pKa = 3.6 CEE1107 pKa = 4.37 VRR1109 pKa = 11.84 TVHH1112 pKa = 7.11 AAQGLSYY1119 pKa = 10.19 PYY1121 pKa = 10.37 VVYY1124 pKa = 10.37 FRR1126 pKa = 11.84 LTRR1129 pKa = 11.84 TDD1131 pKa = 3.32 NDD1133 pKa = 3.58 LFTINKK1139 pKa = 9.33 RR1140 pKa = 11.84 PYY1142 pKa = 8.8 HH1143 pKa = 5.79 LVAISRR1149 pKa = 11.84 HH1150 pKa = 4.9 KK1151 pKa = 11.12 VGLTYY1156 pKa = 10.11 ATVKK1160 pKa = 10.5 IEE1162 pKa = 3.95 DD1163 pKa = 3.89 EE1164 pKa = 4.22 KK1165 pKa = 11.63 DD1166 pKa = 3.19 FSLRR1170 pKa = 11.84 LLRR1173 pKa = 11.84 KK1174 pKa = 9.38 RR1175 pKa = 11.84 YY1176 pKa = 8.94 KK1177 pKa = 10.06 ASKK1180 pKa = 10.72 SFVTEE1185 pKa = 3.99 NSVHH1189 pKa = 5.32 QQMCTLPSTSTSLIPYY1205 pKa = 9.03 LDD1207 pKa = 3.25 QRR1209 pKa = 11.84 EE1210 pKa = 4.13 ISEE1213 pKa = 4.36 KK1214 pKa = 10.67 AIEE1217 pKa = 4.15 ASNMNFPVTTEE1228 pKa = 3.55 PVFFIKK1234 pKa = 10.58 EE1235 pKa = 3.85 NGEE1238 pKa = 3.89 FGVNEE1243 pKa = 4.04 NVGRR1247 pKa = 11.84 AIGNEE1252 pKa = 4.05 MAVVMAIEE1260 pKa = 4.28 EE1261 pKa = 4.46 LCPGNTLYY1269 pKa = 11.15 DD1270 pKa = 3.62 DD1271 pKa = 3.87 TGVNDD1276 pKa = 4.12 IVNLSPLRR1284 pKa = 11.84 CEE1286 pKa = 3.9 VGKK1289 pKa = 10.56 IRR1291 pKa = 11.84 WDD1293 pKa = 3.45 LSYY1296 pKa = 10.5 LTGKK1300 pKa = 6.73 WTTNFVAEE1308 pKa = 4.29 PLLPTGALTRR1318 pKa = 11.84 RR1319 pKa = 11.84 GINPKK1324 pKa = 10.05 QSLLAIEE1331 pKa = 4.35 KK1332 pKa = 10.56 RR1333 pKa = 11.84 NANVLNCQGFSDD1345 pKa = 3.81 RR1346 pKa = 11.84 FKK1348 pKa = 10.44 IAEE1351 pKa = 4.11 KK1352 pKa = 10.61 AVDD1355 pKa = 3.35 KK1356 pKa = 10.39 FFQFFFHH1363 pKa = 6.97 EE1364 pKa = 5.09 DD1365 pKa = 3.02 KK1366 pKa = 11.22 LQALPCGVVGSSSDD1380 pKa = 4.28 SIQMYY1385 pKa = 9.7 YY1386 pKa = 11.02 DD1387 pKa = 3.52 KK1388 pKa = 11.22 AKK1390 pKa = 9.52 KK1391 pKa = 8.33 TVDD1394 pKa = 3.34 EE1395 pKa = 4.47 YY1396 pKa = 11.88 AVLPLSNIDD1405 pKa = 4.0 RR1406 pKa = 11.84 YY1407 pKa = 10.89 RR1408 pKa = 11.84 HH1409 pKa = 5.24 MIKK1412 pKa = 10.11 RR1413 pKa = 11.84 DD1414 pKa = 3.34 IKK1416 pKa = 10.47 PVLDD1420 pKa = 3.59 TSLQSEE1426 pKa = 4.65 YY1427 pKa = 10.55 TKK1429 pKa = 10.95 AATITYY1435 pKa = 8.31 HH1436 pKa = 5.28 QTDD1439 pKa = 3.22 ITQIATSFFTVIKK1452 pKa = 9.92 QRR1454 pKa = 11.84 IMQCKK1459 pKa = 8.97 KK1460 pKa = 9.83 SKK1462 pKa = 10.71 LIIPIDD1468 pKa = 3.78 TEE1470 pKa = 4.23 SDD1472 pKa = 2.82 ISEE1475 pKa = 4.43 TLTRR1479 pKa = 11.84 DD1480 pKa = 3.27 HH1481 pKa = 6.91 LGSEE1485 pKa = 4.28 TGDD1488 pKa = 3.25 FTEE1491 pKa = 4.89 IDD1493 pKa = 3.48 FSKK1496 pKa = 10.6 FDD1498 pKa = 3.27 KK1499 pKa = 10.83 SQNEE1503 pKa = 4.12 VHH1505 pKa = 6.92 QIMQDD1510 pKa = 4.23 LILLRR1515 pKa = 11.84 LGGSLEE1521 pKa = 4.2 LVSIWSQAHH1530 pKa = 4.15 RR1531 pKa = 11.84 HH1532 pKa = 5.04 SRR1534 pKa = 11.84 IKK1536 pKa = 10.76 DD1537 pKa = 3.58 FNCGISFSTDD1547 pKa = 3.44 FQRR1550 pKa = 11.84 RR1551 pKa = 11.84 TGDD1554 pKa = 2.83 AFTFLGNTLVTACMLSYY1571 pKa = 10.84 VLSHH1575 pKa = 7.23 DD1576 pKa = 4.17 DD1577 pKa = 3.65 EE1578 pKa = 5.53 RR1579 pKa = 11.84 KK1580 pKa = 9.39 LRR1582 pKa = 11.84 YY1583 pKa = 8.85 MLVGGDD1589 pKa = 4.22 DD1590 pKa = 3.8 SLICGFEE1597 pKa = 4.42 PIQVQLSPLSTLFNMSCKK1615 pKa = 10.15 LISPSCPYY1623 pKa = 9.73 FASRR1627 pKa = 11.84 YY1628 pKa = 7.16 IVRR1631 pKa = 11.84 VRR1633 pKa = 11.84 DD1634 pKa = 3.63 RR1635 pKa = 11.84 MVCVPDD1641 pKa = 3.88 PMKK1644 pKa = 11.02 LLVKK1648 pKa = 10.04 MGRR1651 pKa = 11.84 KK1652 pKa = 9.18 DD1653 pKa = 3.75 LPDD1656 pKa = 3.6 NEE1658 pKa = 4.47 EE1659 pKa = 3.87 SLEE1662 pKa = 4.01 EE1663 pKa = 3.99 VRR1665 pKa = 11.84 IGLLDD1670 pKa = 3.57 CCKK1673 pKa = 10.22 PLLDD1677 pKa = 5.5 DD1678 pKa = 3.96 EE1679 pKa = 5.24 VKK1681 pKa = 10.68 QLVCILVQLRR1691 pKa = 11.84 YY1692 pKa = 9.59 RR1693 pKa = 11.84 RR1694 pKa = 11.84 EE1695 pKa = 4.06 SPSLFDD1701 pKa = 3.98 ALGFITKK1708 pKa = 10.39 ALATKK1713 pKa = 10.07 TNFLKK1718 pKa = 10.83 LFQVNGRR1725 pKa = 11.84 SAEE1728 pKa = 3.76 KK1729 pKa = 10.06 RR1730 pKa = 11.84 VFDD1733 pKa = 4.07 KK1734 pKa = 10.83 FHH1736 pKa = 5.72 VRR1738 pKa = 3.6
Molecular weight: 198.01 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.952
IPC2_protein 5.97
IPC_protein 6.033
Toseland 6.287
ProMoST 6.427
Dawson 6.338
Bjellqvist 6.351
Wikipedia 6.351
Rodwell 6.326
Grimsley 6.402
Solomon 6.338
Lehninger 6.338
Nozaki 6.634
DTASelect 6.795
Thurlkill 6.81
EMBOSS 6.781
Sillero 6.722
Patrickios 4.151
IPC_peptide 6.351
IPC2_peptide 6.634
IPC2.peptide.svr19 6.631
Protein with the highest isoelectric point:
>tr|A0A1E1JQ47|A0A1E1JQ47_9VIRU RNA helicase OS=Privet leaf blotch-associated virus OX=1811408 GN=ORF1 PE=4 SV=1
MM1 pKa = 7.62 ASKK4 pKa = 9.12 KK5 pKa = 8.83 TMPPSVQYY13 pKa = 10.2 QQSLYY18 pKa = 7.28 QQKK21 pKa = 9.76 LARR24 pKa = 11.84 ARR26 pKa = 11.84 SVRR29 pKa = 11.84 RR30 pKa = 11.84 PGLVAYY36 pKa = 9.96 SEE38 pKa = 4.66 SVNPITGEE46 pKa = 3.89 QFTSNDD52 pKa = 2.91 IASKK56 pKa = 9.76 MKK58 pKa = 10.5 RR59 pKa = 11.84 LNAWLKK65 pKa = 11.16 SNDD68 pKa = 3.21 RR69 pKa = 11.84 DD70 pKa = 3.58 FWDD73 pKa = 3.03 QHH75 pKa = 5.67 FAVQASRR82 pKa = 11.84 PAKK85 pKa = 8.8 ATVGSTSRR93 pKa = 11.84 PQPVQSRR100 pKa = 11.84 AQSSTLLVQDD110 pKa = 3.84 TSRR113 pKa = 11.84 KK114 pKa = 7.89 YY115 pKa = 9.87 WEE117 pKa = 4.5 ALPSKK122 pKa = 10.72 SRR124 pKa = 11.84 MSEE127 pKa = 3.48 IFAVPSEE134 pKa = 4.42 DD135 pKa = 4.55 DD136 pKa = 3.92 APSMTAAITFGGFDD150 pKa = 3.32 QAKK153 pKa = 8.54 VISSIVLEE161 pKa = 4.09 VLVDD165 pKa = 4.04 CKK167 pKa = 10.76 STDD170 pKa = 3.61 EE171 pKa = 4.38 IVGHH175 pKa = 6.14 LAVVEE180 pKa = 4.18 NDD182 pKa = 3.5 PTDD185 pKa = 3.44 QTITDD190 pKa = 3.74 GLIFGLRR197 pKa = 11.84 YY198 pKa = 10.13 GSTEE202 pKa = 3.79 LTSGRR207 pKa = 11.84 RR208 pKa = 11.84 FLKK211 pKa = 10.76 LSVEE215 pKa = 4.17 AGANLGSALAGKK227 pKa = 10.25 RR228 pKa = 11.84 IILKK232 pKa = 10.19 RR233 pKa = 11.84 SSASQQIFLRR243 pKa = 11.84 KK244 pKa = 7.33 WVEE247 pKa = 3.65 YY248 pKa = 8.86 TVVYY252 pKa = 7.57 TAPEE256 pKa = 4.16 FVTGQVMNLAHH267 pKa = 6.99 LPP269 pKa = 3.73
Molecular weight: 29.66 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.902
IPC2_protein 8.858
IPC_protein 8.829
Toseland 9.56
ProMoST 9.297
Dawson 9.809
Bjellqvist 9.487
Wikipedia 9.984
Rodwell 10.131
Grimsley 9.882
Solomon 9.853
Lehninger 9.823
Nozaki 9.575
DTASelect 9.472
Thurlkill 9.648
EMBOSS 9.984
Sillero 9.736
Patrickios 5.601
IPC_peptide 9.853
IPC2_peptide 7.995
IPC2.peptide.svr19 7.934
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2353
269
1738
784.3
88.64
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.652 ± 1.277
1.912 ± 0.931
6.63 ± 0.927
5.61 ± 0.309
4.632 ± 0.388
5.355 ± 0.238
2.21 ± 0.342
5.695 ± 0.604
6.46 ± 0.243
10.072 ± 0.51
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.21 ± 0.241
3.952 ± 0.529
4.632 ± 0.528
3.995 ± 0.838
5.525 ± 0.48
7.99 ± 1.624
5.652 ± 0.368
7.437 ± 0.537
1.105 ± 0.109
3.272 ± 0.446
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here