Belnapia rosea

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Belnapia

Average proteome isoelectric point is 6.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5712 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G6PRX9|A0A1G6PRX9_9PROT Disulfide bond formation protein DsbB OS=Belnapia rosea OX=938405 GN=SAMN04487779_1002495 PE=4 SV=1
MM1 pKa = 6.83TAYY4 pKa = 10.26HH5 pKa = 6.06GTNASEE11 pKa = 4.3TFAGSASADD20 pKa = 3.56MIFGEE25 pKa = 4.9GGNDD29 pKa = 3.24SLFGNDD35 pKa = 4.91GNDD38 pKa = 3.18SLYY41 pKa = 11.14GGTGADD47 pKa = 3.92MLNGGAGDD55 pKa = 5.07DD56 pKa = 4.56IICGGIGNDD65 pKa = 3.55VLTGGAGADD74 pKa = 2.94IFRR77 pKa = 11.84FTGVTSTSPGDD88 pKa = 3.48SEE90 pKa = 6.18GIGDD94 pKa = 4.78VINDD98 pKa = 3.94FQQGEE103 pKa = 4.21DD104 pKa = 3.51HH105 pKa = 7.12IKK107 pKa = 9.27FTGVSQRR114 pKa = 11.84TVTMNLEE121 pKa = 4.08ADD123 pKa = 3.71GDD125 pKa = 4.35LVIHH129 pKa = 6.37YY130 pKa = 7.61GTLGGAPGPNQGTITLKK147 pKa = 11.11GLGQYY152 pKa = 10.93LSGSDD157 pKa = 4.53FIFTT161 pKa = 4.27

Molecular weight: 16.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G6SHV9|A0A1G6SHV9_9PROT Cytoskeleton protein RodZ OS=Belnapia rosea OX=938405 GN=SAMN04487779_100512 PE=4 SV=1
MM1 pKa = 7.38HH2 pKa = 7.58AFLAWALGLIGGAFFSIGLGGMWAQVVAALRR33 pKa = 11.84SPAFGGYY40 pKa = 9.38SATGWLVPTLLLALAAAAWAGAALIWAARR69 pKa = 11.84PRR71 pKa = 11.84PRR73 pKa = 11.84AILPRR78 pKa = 11.84HH79 pKa = 6.48LGRR82 pKa = 11.84GTAFRR87 pKa = 11.84RR88 pKa = 11.84RR89 pKa = 11.84RR90 pKa = 3.43

Molecular weight: 9.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5712

0

5712

1791141

24

2426

313.6

33.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.709 ± 0.063

0.876 ± 0.009

4.895 ± 0.027

5.728 ± 0.029

3.197 ± 0.021

9.472 ± 0.033

2.003 ± 0.016

4.105 ± 0.021

1.904 ± 0.025

11.101 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.371 ± 0.014

1.99 ± 0.018

6.342 ± 0.031

3.079 ± 0.02

8.481 ± 0.037

4.387 ± 0.022

4.904 ± 0.024

7.132 ± 0.025

1.527 ± 0.013

1.797 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski