Myoviridae sp.

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae

Average proteome isoelectric point is 6.34

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 545 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A345MMX9|A0A345MMX9_9CAUD Erythromycin resistance protein OS=Myoviridae sp. OX=2202564 PE=4 SV=1
MM1 pKa = 7.66LFIPKK6 pKa = 9.92RR7 pKa = 11.84NTEE10 pKa = 4.35GMVSMIKK17 pKa = 9.69MSVKK21 pKa = 8.76ITEE24 pKa = 4.34IEE26 pKa = 3.72WDD28 pKa = 3.89FDD30 pKa = 3.77DD31 pKa = 4.9EE32 pKa = 4.84TYY34 pKa = 11.19QDD36 pKa = 3.36IEE38 pKa = 4.48GVNLHH43 pKa = 6.39LPSVPFYY50 pKa = 10.02VTVEE54 pKa = 4.28AEE56 pKa = 5.34DD57 pKa = 4.98DD58 pKa = 5.06DD59 pKa = 5.21IDD61 pKa = 4.06NLPVADD67 pKa = 5.73AISDD71 pKa = 3.71EE72 pKa = 4.41YY73 pKa = 10.61GWCVKK78 pKa = 10.32NCEE81 pKa = 3.97YY82 pKa = 10.79DD83 pKa = 3.18IEE85 pKa = 4.62TVLVV89 pKa = 3.66

Molecular weight: 10.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A345MM35|A0A345MM35_9CAUD Uncharacterized protein OS=Myoviridae sp. OX=2202564 PE=4 SV=1
MM1 pKa = 7.62RR2 pKa = 11.84ALYY5 pKa = 9.8HH6 pKa = 5.92VSITIDD12 pKa = 2.79RR13 pKa = 11.84RR14 pKa = 11.84KK15 pKa = 9.79IKK17 pKa = 10.45RR18 pKa = 11.84QINKK22 pKa = 8.83IQKK25 pKa = 9.57KK26 pKa = 9.98DD27 pKa = 3.34SKK29 pKa = 10.57LSKK32 pKa = 9.94KK33 pKa = 10.29RR34 pKa = 11.84RR35 pKa = 11.84DD36 pKa = 3.33ISNHH40 pKa = 3.8YY41 pKa = 10.62VFFEE45 pKa = 4.19FTTNLYY51 pKa = 10.92NIFCIFIKK59 pKa = 10.4RR60 pKa = 11.84SNSKK64 pKa = 9.27IHH66 pKa = 5.88YY67 pKa = 5.67QTKK70 pKa = 10.17AYY72 pKa = 9.69RR73 pKa = 11.84NNYY76 pKa = 8.55LRR78 pKa = 11.84LICNIIYY85 pKa = 9.02NQRR88 pKa = 11.84FLTYY92 pKa = 8.71SRR94 pKa = 11.84KK95 pKa = 10.13YY96 pKa = 10.34KK97 pKa = 10.56VSQSKK102 pKa = 10.78NKK104 pKa = 10.19IITLEE109 pKa = 3.9

Molecular weight: 13.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

545

0

545

119766

80

5045

219.8

25.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.458 ± 0.116

1.292 ± 0.055

6.543 ± 0.12

6.129 ± 0.234

4.594 ± 0.083

5.272 ± 0.178

1.581 ± 0.07

9.897 ± 0.114

8.482 ± 0.266

7.325 ± 0.111

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.378 ± 0.072

8.566 ± 0.225

3.003 ± 0.07

2.614 ± 0.054

2.85 ± 0.103

7.734 ± 0.226

6.319 ± 0.215

5.29 ± 0.09

1.033 ± 0.052

5.64 ± 0.154
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski