Dishui Lake virophage 3

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Maveriviricetes; Priklausovirales; Lavidaviridae; unclassified Lavidaviridae

Average proteome isoelectric point is 7.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6G6XN60|A0A6G6XN60_9VIRU Putative major capsid protein OS=Dishui Lake virophage 3 OX=2704066 PE=4 SV=1
MM1 pKa = 6.42TTRR4 pKa = 11.84GNLTSADD11 pKa = 4.25PYY13 pKa = 10.97NLYY16 pKa = 10.92YY17 pKa = 10.57DD18 pKa = 3.7INVVSDD24 pKa = 3.82YY25 pKa = 11.42NPTLVGTTAPPLTFNEE41 pKa = 3.77IRR43 pKa = 11.84QNPIIKK49 pKa = 10.47YY50 pKa = 9.54PEE52 pKa = 5.12DD53 pKa = 3.49YY54 pKa = 10.51LLSVVRR60 pKa = 11.84FSIEE64 pKa = 4.22TPTLPIFIPQVLLGQPNPNKK84 pKa = 10.47LIYY87 pKa = 9.58AWGMSVTDD95 pKa = 3.8YY96 pKa = 11.18SAVGTPTYY104 pKa = 10.48YY105 pKa = 10.95LPAQEE110 pKa = 3.88NWIYY114 pKa = 10.77IPDD117 pKa = 4.94DD118 pKa = 3.48LTIPPPQGALTFQDD132 pKa = 3.75LTTEE136 pKa = 4.11YY137 pKa = 10.48YY138 pKa = 9.99YY139 pKa = 11.55VNEE142 pKa = 4.24FSLILQYY149 pKa = 11.71ANNALKK155 pKa = 10.6AAFDD159 pKa = 3.76NFNTYY164 pKa = 8.44LTGIGQPTLGAFGGVPANIAQNYY187 pKa = 7.5CPQMTYY193 pKa = 11.01DD194 pKa = 3.52PRR196 pKa = 11.84GEE198 pKa = 4.11LFSLSFPLCPPALAGAAPPFAYY220 pKa = 8.5DD221 pKa = 3.78TYY223 pKa = 11.34DD224 pKa = 3.26QNLANTAGFAGRR236 pKa = 11.84VIKK239 pKa = 10.66LYY241 pKa = 10.72MNTPLSNLLNSFPTVFQGNQQFQLTTGTEE270 pKa = 4.04DD271 pKa = 3.41MIVVYY276 pKa = 10.69NNQYY280 pKa = 10.85QNTNGGSRR288 pKa = 11.84PTYY291 pKa = 9.41PLTPVASTVAAIPQIIVPQEE311 pKa = 3.66HH312 pKa = 6.34STTILFSPISSLVFSTSLLPVQNTLLSKK340 pKa = 9.79PAIFNFYY347 pKa = 11.07DD348 pKa = 3.65GVTSSNLRR356 pKa = 11.84SSGNNNVTAPVLTDD370 pKa = 4.13FEE372 pKa = 4.72LQGATGTSSQTRR384 pKa = 11.84ITYY387 pKa = 8.39TPTAEE392 pKa = 3.92YY393 pKa = 11.03RR394 pKa = 11.84MLDD397 pKa = 3.46LRR399 pKa = 11.84GTTPVNAVEE408 pKa = 5.21VSVFWKK414 pKa = 10.67DD415 pKa = 3.22KK416 pKa = 10.61FSGLHH421 pKa = 5.86RR422 pKa = 11.84FNLAAGCAASIKK434 pKa = 10.3ILFRR438 pKa = 11.84RR439 pKa = 11.84KK440 pKa = 10.0DD441 pKa = 3.69FYY443 pKa = 11.55NATIDD448 pKa = 3.32

Molecular weight: 49.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6G6XMN2|A0A6G6XMN2_9VIRU Uncharacterized protein OS=Dishui Lake virophage 3 OX=2704066 PE=4 SV=1
MM1 pKa = 7.18ITQTLINAFFRR12 pKa = 11.84VSPATTPSPPPSPDD26 pKa = 3.48PLTDD30 pKa = 3.06DD31 pKa = 3.13WVVIDD36 pKa = 3.98EE37 pKa = 4.42RR38 pKa = 11.84FGVRR42 pKa = 11.84KK43 pKa = 10.06DD44 pKa = 3.22NYY46 pKa = 9.56AINRR50 pKa = 11.84IGQVKK55 pKa = 9.59NLKK58 pKa = 9.73FNKK61 pKa = 9.33ILKK64 pKa = 10.29SYY66 pKa = 8.17FCKK69 pKa = 10.57SIGYY73 pKa = 8.32MCVSLKK79 pKa = 10.73RR80 pKa = 11.84SMDD83 pKa = 3.11ASGNLVRR90 pKa = 11.84PNNGYY95 pKa = 9.37GRR97 pKa = 11.84KK98 pKa = 8.67PVKK101 pKa = 9.47DD102 pKa = 3.56TPNNEE107 pKa = 3.77TLMLVHH113 pKa = 6.96RR114 pKa = 11.84LVGNVFIPNTNPNYY128 pKa = 10.46RR129 pKa = 11.84IIDD132 pKa = 4.31HH133 pKa = 7.24IDD135 pKa = 3.28GNKK138 pKa = 10.21LNNDD142 pKa = 3.29YY143 pKa = 11.33RR144 pKa = 11.84NLRR147 pKa = 11.84WCDD150 pKa = 3.16QRR152 pKa = 11.84RR153 pKa = 11.84NANNAKK159 pKa = 10.18SNKK162 pKa = 9.34KK163 pKa = 8.42YY164 pKa = 10.13WGVRR168 pKa = 11.84WAKK171 pKa = 10.85NMEE174 pKa = 4.04KK175 pKa = 9.73WSASIQTTVNYY186 pKa = 10.35NPNEE190 pKa = 4.29TFTHH194 pKa = 6.54FLGHH198 pKa = 6.47YY199 pKa = 9.19DD200 pKa = 4.09DD201 pKa = 5.23EE202 pKa = 4.99VMAARR207 pKa = 11.84VVKK210 pKa = 10.64KK211 pKa = 10.23FMTEE215 pKa = 3.68NYY217 pKa = 8.23PNEE220 pKa = 4.08MTGGRR225 pKa = 11.84RR226 pKa = 11.84FIEE229 pKa = 4.34EE230 pKa = 3.77

Molecular weight: 26.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12

0

12

4760

92

1726

396.7

45.05

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.227 ± 1.065

0.987 ± 0.31

6.282 ± 0.349

6.87 ± 1.37

4.055 ± 0.405

5.819 ± 0.327

1.492 ± 0.425

5.756 ± 0.6

7.941 ± 1.303

7.731 ± 0.652

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.878 ± 0.303

5.567 ± 0.864

4.958 ± 0.492

3.95 ± 0.483

5.693 ± 0.586

5.798 ± 0.7

5.945 ± 0.741

5.903 ± 0.298

1.239 ± 0.157

3.908 ± 0.427
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski