Gluconobacter morbifer G707

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter; Gluconobacter morbifer

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2846 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G6XKP4|G6XKP4_9PROT CMD domain-containing protein OS=Gluconobacter morbifer G707 OX=1088869 GN=GMO_20600 PE=4 SV=1
MM1 pKa = 7.69AGLKK5 pKa = 10.39SSAHH9 pKa = 6.12YY10 pKa = 10.92DD11 pKa = 3.39LTSGSNSITGGSAAQGLISSGGYY34 pKa = 6.83YY35 pKa = 9.82TINGEE40 pKa = 4.32LGYY43 pKa = 10.03IAAGSYY49 pKa = 10.89GDD51 pKa = 4.0SSNPQDD57 pKa = 3.61TLNSGVAIDD66 pKa = 4.73LRR68 pKa = 11.84NNTASSVSVLAGDD81 pKa = 3.61QAGVTVYY88 pKa = 10.82AGDD91 pKa = 3.46QSGSFVGGLGDD102 pKa = 4.16NVFLGSGKK110 pKa = 8.31TGSWNVATGSGNDD123 pKa = 4.06TILGTNGNSTIDD135 pKa = 3.64GGTGDD140 pKa = 3.58NLIYY144 pKa = 10.53LGSGTNVVRR153 pKa = 11.84SEE155 pKa = 4.15GQDD158 pKa = 3.39TIDD161 pKa = 3.8GGGGVDD167 pKa = 3.4TVTLLGGSSVVSLQNNATVYY187 pKa = 8.83DD188 pKa = 4.14TTGHH192 pKa = 6.33NDD194 pKa = 2.99VTVGSNSSITGGSSSTYY211 pKa = 8.28FTTGSMSTISGGQNDD226 pKa = 4.98TISASGDD233 pKa = 3.29LEE235 pKa = 4.17QIRR238 pKa = 11.84GSGNNLSVGGSLTFLNGTGSTTITAGNATLFGASGQDD275 pKa = 2.97IQYY278 pKa = 9.35TGTSGTALYY287 pKa = 10.55VAGDD291 pKa = 3.68GSEE294 pKa = 4.49TIDD297 pKa = 3.49ASASKK302 pKa = 9.03TAINAFAGTGDD313 pKa = 3.58DD314 pKa = 4.13TIIGGSAADD323 pKa = 3.71TMVGGSGNATLTGGSGAANLFALVDD348 pKa = 4.32GKK350 pKa = 11.01AGGDD354 pKa = 3.47YY355 pKa = 10.49TITDD359 pKa = 4.54FGSAAGNLVALYY371 pKa = 10.67NYY373 pKa = 9.63GLNSNTLQTVLNDD386 pKa = 3.41ATVSGGNTTIALSDD400 pKa = 3.36NSKK403 pKa = 8.49ITFVGVTDD411 pKa = 4.97LKK413 pKa = 10.43TSNFTGG419 pKa = 3.49

Molecular weight: 40.78 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G6XH41|G6XH41_9PROT Glycerol-3-phosphate dehydrogenase OS=Gluconobacter morbifer G707 OX=1088869 GN=GMO_08060 PE=3 SV=1
MM1 pKa = 7.63PRR3 pKa = 11.84PSGFSMPDD11 pKa = 2.99ALEE14 pKa = 3.6QRR16 pKa = 11.84LIGEE20 pKa = 4.73LTTAVDD26 pKa = 3.6PAVVAFAHH34 pKa = 6.31NLAQSMPAPPLGVLFYY50 pKa = 11.45GSMLRR55 pKa = 11.84SADD58 pKa = 3.41PDD60 pKa = 4.65GILDD64 pKa = 3.9FYY66 pKa = 10.9IITEE70 pKa = 4.15TARR73 pKa = 11.84DD74 pKa = 3.94FPGGFLARR82 pKa = 11.84AANRR86 pKa = 11.84LLPPNVRR93 pKa = 11.84YY94 pKa = 10.34AEE96 pKa = 4.26FTASDD101 pKa = 3.55NRR103 pKa = 11.84ILRR106 pKa = 11.84AKK108 pKa = 10.11IAILSRR114 pKa = 11.84AQFAARR120 pKa = 11.84TSLASLDD127 pKa = 3.53TTLWARR133 pKa = 11.84FCQPARR139 pKa = 11.84LIWVRR144 pKa = 11.84GPEE147 pKa = 3.98AADD150 pKa = 3.48ALLDD154 pKa = 4.53LIARR158 pKa = 11.84CVTTAACWSALLGEE172 pKa = 4.64PRR174 pKa = 11.84MTALGFWRR182 pKa = 11.84TLFAQTYY189 pKa = 8.23ASEE192 pKa = 4.13LRR194 pKa = 11.84VEE196 pKa = 4.32KK197 pKa = 10.51KK198 pKa = 10.83GRR200 pKa = 11.84GNSLLQGQEE209 pKa = 3.29ARR211 pKa = 11.84YY212 pKa = 9.01AALLALGWARR222 pKa = 11.84AHH224 pKa = 6.18LQFSADD230 pKa = 3.61GQLLEE235 pKa = 4.18PVIPRR240 pKa = 11.84EE241 pKa = 4.06LRR243 pKa = 11.84LKK245 pKa = 10.48AVQRR249 pKa = 11.84WQLVRR254 pKa = 11.84RR255 pKa = 11.84TGQPRR260 pKa = 11.84NVMRR264 pKa = 11.84LLKK267 pKa = 10.67GAFTFEE273 pKa = 4.08NGASYY278 pKa = 10.1LAWKK282 pKa = 9.51IRR284 pKa = 11.84RR285 pKa = 11.84HH286 pKa = 5.11TGFDD290 pKa = 3.16LRR292 pKa = 11.84LSAFEE297 pKa = 3.93QRR299 pKa = 11.84HH300 pKa = 5.63PLLMLPALLWRR311 pKa = 11.84ARR313 pKa = 11.84KK314 pKa = 8.72LWNRR318 pKa = 11.84PQDD321 pKa = 3.27GMVPEE326 pKa = 4.97KK327 pKa = 11.14KK328 pKa = 10.33NGTQQ332 pKa = 3.1

Molecular weight: 37.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2846

0

2846

857605

37

1992

301.3

32.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.011 ± 0.058

1.032 ± 0.016

5.598 ± 0.034

5.324 ± 0.044

3.567 ± 0.03

8.416 ± 0.044

2.467 ± 0.025

4.971 ± 0.035

2.914 ± 0.033

10.464 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.581 ± 0.022

2.773 ± 0.034

5.583 ± 0.04

3.583 ± 0.032

7.239 ± 0.054

6.017 ± 0.042

5.816 ± 0.037

7.023 ± 0.042

1.385 ± 0.02

2.237 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski