Motilibacter peucedani

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Motilibacterales; Motilibacteraceae; Motilibacter

Average proteome isoelectric point is 6.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3836 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A420XPH0|A0A420XPH0_9ACTN CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Motilibacter peucedani OX=598650 GN=CLV35_2587 PE=4 SV=1
MM1 pKa = 7.3SHH3 pKa = 7.55DD4 pKa = 4.5PVQAWASVEE13 pKa = 3.85AWLGAHH19 pKa = 7.35APRR22 pKa = 11.84SAGVLSPPADD32 pKa = 3.75PASIAHH38 pKa = 6.61AEE40 pKa = 4.31GVTGVPWPDD49 pKa = 3.07ALKK52 pKa = 9.7TLLLAHH58 pKa = 7.17DD59 pKa = 5.03GVDD62 pKa = 4.83DD63 pKa = 5.09PYY65 pKa = 11.74DD66 pKa = 3.93DD67 pKa = 4.36ASGIFFGAPLLSVQGILIALEE88 pKa = 3.84QLVVVAGVMDD98 pKa = 4.74DD99 pKa = 4.08FGIPAAMDD107 pKa = 3.99PAAGGPVGHH116 pKa = 5.87YY117 pKa = 9.99VPWLLPFAGLEE128 pKa = 4.06GSFWVLDD135 pKa = 3.85LRR137 pKa = 11.84PGEE140 pKa = 4.06QSGCVCYY147 pKa = 10.06YY148 pKa = 10.89SPVEE152 pKa = 4.03QLVAPAAAASRR163 pKa = 11.84VEE165 pKa = 4.47FTAQLALCLSTSAPWNGVLRR185 pKa = 11.84PFVTDD190 pKa = 4.62GALDD194 pKa = 3.6WAEE197 pKa = 3.84LDD199 pKa = 3.44AAEE202 pKa = 4.87VVDD205 pKa = 5.6LRR207 pKa = 4.71

Molecular weight: 21.56 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A420XPQ3|A0A420XPQ3_9ACTN ADP-ribose pyrophosphatase YjhB (NUDIX family) OS=Motilibacter peucedani OX=598650 GN=CLV35_1699 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.87KK16 pKa = 9.7HH17 pKa = 5.84RR18 pKa = 11.84KK19 pKa = 8.7LLRR22 pKa = 11.84KK23 pKa = 7.97TRR25 pKa = 11.84VQRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.81KK32 pKa = 9.63

Molecular weight: 4.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3836

0

3836

1277826

29

1848

333.1

35.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.518 ± 0.073

0.677 ± 0.01

5.955 ± 0.031

5.317 ± 0.044

2.513 ± 0.024

9.454 ± 0.035

2.032 ± 0.015

2.418 ± 0.026

1.639 ± 0.029

10.789 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.459 ± 0.013

1.472 ± 0.025

5.876 ± 0.033

2.719 ± 0.022

7.952 ± 0.046

5.769 ± 0.035

6.013 ± 0.045

10.038 ± 0.039

1.514 ± 0.017

1.874 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski