Penicillium brasilianum

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11935 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0F7VJ14|A0A0F7VJ14_PENBI Aspartate aminotransferase OS=Penicillium brasilianum OX=104259 GN=PMG11_04320 PE=3 SV=1
MM1 pKa = 7.59GFLKK5 pKa = 10.74KK6 pKa = 9.62LTLFAAFASLAAALPYY22 pKa = 10.57GEE24 pKa = 5.19RR25 pKa = 11.84PPTLVNLAAVAPTTTTAAAASTSSTSVTTSATSISTSISTSTSTSTSTSTSTSTSTSNGIKK86 pKa = 9.83IVNNLDD92 pKa = 3.1QTVYY96 pKa = 10.51LWSTSDD102 pKa = 3.32TSSDD106 pKa = 3.48MQTLTSGSTYY116 pKa = 10.16TEE118 pKa = 3.78TWRR121 pKa = 11.84TNSDD125 pKa = 2.95GGGISIKK132 pKa = 9.88MATSTSEE139 pKa = 4.03SSVLQFEE146 pKa = 4.63YY147 pKa = 10.45TKK149 pKa = 10.85SDD151 pKa = 3.29EE152 pKa = 4.34TLWWDD157 pKa = 4.12LSSINLDD164 pKa = 3.34SDD166 pKa = 4.13SEE168 pKa = 4.72FITSGFAVTTDD179 pKa = 3.93DD180 pKa = 4.78SSCTTASCAAGDD192 pKa = 3.94TDD194 pKa = 5.88CADD197 pKa = 3.88SYY199 pKa = 11.7QNPDD203 pKa = 3.45DD204 pKa = 4.23VDD206 pKa = 3.66TRR208 pKa = 11.84SCSASAAFTMTIGG221 pKa = 3.51

Molecular weight: 22.85 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0F7TRT7|A0A0F7TRT7_PENBI Acyl_transf_3 domain-containing protein OS=Penicillium brasilianum OX=104259 GN=PMG11_06420 PE=4 SV=1
MM1 pKa = 7.56LCLRR5 pKa = 11.84CRR7 pKa = 11.84ALPSFQATVSAMRR20 pKa = 11.84TPMTRR25 pKa = 11.84ITQFTPQTSLTSTARR40 pKa = 11.84LSSRR44 pKa = 11.84PFSTTLLSTPTRR56 pKa = 11.84LQPSQTLSVSPRR68 pKa = 11.84TPSTSALSTPSISSLLPPQSRR89 pKa = 11.84SFSATASLGVKK100 pKa = 9.98RR101 pKa = 11.84NTFRR105 pKa = 11.84PSRR108 pKa = 11.84RR109 pKa = 11.84VQKK112 pKa = 10.38RR113 pKa = 11.84RR114 pKa = 11.84SGFLARR120 pKa = 11.84NTDD123 pKa = 2.92RR124 pKa = 11.84KK125 pKa = 10.79GRR127 pKa = 11.84LTLIRR132 pKa = 11.84RR133 pKa = 11.84RR134 pKa = 11.84LKK136 pKa = 10.46GRR138 pKa = 11.84KK139 pKa = 8.86AMSWW143 pKa = 3.05

Molecular weight: 15.94 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11426

509

11935

5855176

47

6077

490.6

54.3

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.575 ± 0.019

1.245 ± 0.009

5.618 ± 0.015

6.11 ± 0.022

3.8 ± 0.013

6.776 ± 0.022

2.425 ± 0.01

5.048 ± 0.016

4.543 ± 0.018

9.052 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.196 ± 0.008

3.645 ± 0.011

6.02 ± 0.024

4.087 ± 0.016

6.068 ± 0.02

8.44 ± 0.024

5.965 ± 0.016

6.115 ± 0.014

1.49 ± 0.009

2.784 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski