Sutterella sp. AM11-39

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; unclassified Sutterella

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1912 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A415CFK7|A0A415CFK7_9BURK TetR/AcrR family transcriptional regulator OS=Sutterella sp. AM11-39 OX=2292075 GN=DW133_05565 PE=4 SV=1
MM1 pKa = 7.79IYY3 pKa = 10.13FYY5 pKa = 10.52WLTGLGMAILLSVVVSTTLDD25 pKa = 3.25NRR27 pKa = 11.84EE28 pKa = 4.21AADD31 pKa = 3.58EE32 pKa = 4.11

Molecular weight: 3.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A415CFR0|A0A415CFR0_9BURK 16S rRNA m5C967 methyltransferase OS=Sutterella sp. AM11-39 OX=2292075 GN=DW133_05960 PE=3 SV=1
MM1 pKa = 6.85ATKK4 pKa = 9.51RR5 pKa = 11.84TYY7 pKa = 10.41QPSKK11 pKa = 7.96TKK13 pKa = 10.33RR14 pKa = 11.84ARR16 pKa = 11.84THH18 pKa = 5.82GFLVRR23 pKa = 11.84SRR25 pKa = 11.84TKK27 pKa = 10.32GGRR30 pKa = 11.84AVLARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84KK39 pKa = 9.37GRR41 pKa = 11.84HH42 pKa = 3.98VLALL46 pKa = 3.77

Molecular weight: 5.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1912

0

1912

646839

21

5244

338.3

37.14

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.629 ± 0.067

1.373 ± 0.029

5.35 ± 0.042

6.29 ± 0.056

4.07 ± 0.04

7.593 ± 0.059

1.869 ± 0.023

5.457 ± 0.037

5.009 ± 0.045

9.687 ± 0.065

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.651 ± 0.027

3.316 ± 0.042

4.315 ± 0.049

3.307 ± 0.035

6.005 ± 0.058

5.875 ± 0.056

5.591 ± 0.05

7.853 ± 0.041

1.241 ± 0.021

2.52 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski