Solitalea koreensis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2864 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A521DDR3|A0A521DDR3_9SPHI Uncharacterized protein OS=Solitalea koreensis OX=543615 GN=SAMN06265350_106220 PE=4 SV=1
MM1 pKa = 7.19YY2 pKa = 7.77WTLEE6 pKa = 4.21LASHH10 pKa = 7.01LEE12 pKa = 4.08DD13 pKa = 4.93APWPATKK20 pKa = 10.54DD21 pKa = 3.44EE22 pKa = 5.26LIDD25 pKa = 3.48YY26 pKa = 8.56AIRR29 pKa = 11.84SGAPVEE35 pKa = 4.53VIEE38 pKa = 4.56NLQALEE44 pKa = 4.69DD45 pKa = 4.28DD46 pKa = 4.31GEE48 pKa = 4.31PYY50 pKa = 11.04EE51 pKa = 4.81NIEE54 pKa = 4.55EE55 pKa = 4.16VWPDD59 pKa = 3.76YY60 pKa = 7.77PTKK63 pKa = 10.9DD64 pKa = 2.91DD65 pKa = 4.08FLFNEE70 pKa = 4.77DD71 pKa = 3.58EE72 pKa = 4.45YY73 pKa = 12.0

Molecular weight: 8.57 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A521DYT3|A0A521DYT3_9SPHI Uncharacterized protein OS=Solitalea koreensis OX=543615 GN=SAMN06265350_10978 PE=4 SV=1
MM1 pKa = 6.21VRR3 pKa = 11.84KK4 pKa = 9.98RR5 pKa = 11.84IKK7 pKa = 10.0RR8 pKa = 11.84GLRR11 pKa = 11.84VSRR14 pKa = 11.84YY15 pKa = 9.02IIYY18 pKa = 10.44KK19 pKa = 7.76EE20 pKa = 3.88TLVDD24 pKa = 3.64YY25 pKa = 10.82RR26 pKa = 11.84EE27 pKa = 4.95HH28 pKa = 5.62IWSFIGAFIGIGIIAFIQSLSLAKK52 pKa = 10.52LEE54 pKa = 4.0NVFLIGSFGASSVLVYY70 pKa = 10.21GAIQSPLAQPRR81 pKa = 11.84NLIGGHH87 pKa = 5.36FVSALVGVTVCHH99 pKa = 6.83ILPDD103 pKa = 4.8IIWLTASTAVAVSIVAMQITKK124 pKa = 9.64TMHH127 pKa = 6.4PPGGATALIAVTGSEE142 pKa = 4.33KK143 pKa = 10.31IKK145 pKa = 10.56ALGYY149 pKa = 9.98IYY151 pKa = 10.75VLSPVLTGCLILLTVALIFNNMTSHH176 pKa = 7.29RR177 pKa = 11.84KK178 pKa = 9.24YY179 pKa = 8.87PTNKK183 pKa = 9.75RR184 pKa = 11.84FTNSLKK190 pKa = 10.6RR191 pKa = 11.84IITRR195 pKa = 11.84RR196 pKa = 11.84RR197 pKa = 11.84TVRR200 pKa = 11.84SPNSIKK206 pKa = 10.87

Molecular weight: 22.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2864

0

2864

989305

26

2903

345.4

38.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.149 ± 0.044

0.871 ± 0.015

5.179 ± 0.03

6.044 ± 0.045

5.04 ± 0.042

6.628 ± 0.04

1.824 ± 0.023

7.573 ± 0.05

7.503 ± 0.048

9.418 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.409 ± 0.022

5.777 ± 0.046

3.708 ± 0.027

3.559 ± 0.026

3.687 ± 0.03

6.514 ± 0.04

5.612 ± 0.058

6.427 ± 0.033

1.102 ± 0.017

3.977 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski