Dendrolimus punctatus cypovirus 22

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Spinareovirinae; Cypovirus; unclassified Cypovirus

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A7E6B9|A0A0A7E6B9_9REOV Uncharacterized protein OS=Dendrolimus punctatus cypovirus 22 OX=1577776 PE=4 SV=1
MM1 pKa = 8.15EE2 pKa = 4.61YY3 pKa = 9.76PQSGFFAAEE12 pKa = 4.01TPNDD16 pKa = 3.2NRR18 pKa = 11.84TITLLQVRR26 pKa = 11.84GQQPRR31 pKa = 11.84NIPITDD37 pKa = 3.43ILDD40 pKa = 4.31HH41 pKa = 7.46IEE43 pKa = 4.51GPNTDD48 pKa = 4.3EE49 pKa = 4.75LFEE52 pKa = 4.39IQDD55 pKa = 3.55VTEE58 pKa = 4.19YY59 pKa = 10.95EE60 pKa = 4.24PDD62 pKa = 3.47HH63 pKa = 6.01TTHH66 pKa = 6.5ATNTQVFNINVLLRR80 pKa = 11.84SVFLSEE86 pKa = 4.12MTNVSQIPHH95 pKa = 6.85RR96 pKa = 11.84FGIFNVMSAEE106 pKa = 4.15DD107 pKa = 3.86ATCVVQKK114 pKa = 10.84DD115 pKa = 3.62GTYY118 pKa = 9.01YY119 pKa = 11.21ASGKK123 pKa = 7.85TRR125 pKa = 11.84DD126 pKa = 3.83ADD128 pKa = 4.32SIPHH132 pKa = 5.1VYY134 pKa = 9.61IRR136 pKa = 11.84NFALCMLKK144 pKa = 10.11VAPYY148 pKa = 10.68LRR150 pKa = 11.84GDD152 pKa = 4.51RR153 pKa = 11.84INVFAQLTHH162 pKa = 6.56FMQTVRR168 pKa = 11.84RR169 pKa = 11.84NRR171 pKa = 11.84SKK173 pKa = 10.25FWLRR177 pKa = 11.84FNLSDD182 pKa = 5.15LNPLHH187 pKa = 7.12LSNQLSKK194 pKa = 11.29FNLFLLLLDD203 pKa = 4.32LANYY207 pKa = 8.56EE208 pKa = 4.23HH209 pKa = 6.57FQVNQSAMLLGSINACLVCLFAAGISDD236 pKa = 3.4AVEE239 pKa = 3.63RR240 pKa = 11.84TTIDD244 pKa = 3.2EE245 pKa = 4.24VKK247 pKa = 10.28YY248 pKa = 10.24LQFKK252 pKa = 10.11IPSPSEE258 pKa = 3.59NYY260 pKa = 9.08VRR262 pKa = 11.84KK263 pKa = 10.12DD264 pKa = 3.04LLQPFFHH271 pKa = 6.37SQRR274 pKa = 11.84AIFVGFLINAFIQPYY289 pKa = 9.01MIVAFPLEE297 pKa = 4.08VRR299 pKa = 11.84NQLFPSNRR307 pKa = 11.84VPVVRR312 pKa = 11.84EE313 pKa = 3.98DD314 pKa = 4.03EE315 pKa = 4.34PVSDD319 pKa = 4.41HH320 pKa = 8.04DD321 pKa = 4.88SGEE324 pKa = 3.82ASNFYY329 pKa = 10.91DD330 pKa = 5.06LYY332 pKa = 11.44VSLNYY337 pKa = 10.46GAFPSDD343 pKa = 2.83GGIYY347 pKa = 10.05KK348 pKa = 10.32YY349 pKa = 10.73LSNSDD354 pKa = 3.5DD355 pKa = 3.91VIYY358 pKa = 11.06LDD360 pKa = 5.15VFDD363 pKa = 5.03TMPFQQRR370 pKa = 11.84YY371 pKa = 4.96QKK373 pKa = 10.95RR374 pKa = 11.84NIRR377 pKa = 11.84GLFDD381 pKa = 3.6DD382 pKa = 4.64TLNTNLNVIRR392 pKa = 11.84VVHH395 pKa = 6.33HH396 pKa = 6.69EE397 pKa = 4.85DD398 pKa = 3.44YY399 pKa = 11.42DD400 pKa = 4.22SVLLLDD406 pKa = 4.12ILQPFNEE413 pKa = 4.28SLSRR417 pKa = 11.84CLLTRR422 pKa = 11.84YY423 pKa = 10.01IIDD426 pKa = 3.19RR427 pKa = 11.84RR428 pKa = 11.84MIAVIASSTPCGLSDD443 pKa = 3.76GQLIFNAHH451 pKa = 4.54QLEE454 pKa = 4.45VFEE457 pKa = 6.01LITEE461 pKa = 4.64RR462 pKa = 11.84YY463 pKa = 7.68MNDD466 pKa = 3.62VIRR469 pKa = 11.84HH470 pKa = 5.39IPDD473 pKa = 3.94GYY475 pKa = 11.45GLAEE479 pKa = 4.18DD480 pKa = 4.14RR481 pKa = 11.84ARR483 pKa = 11.84VLHH486 pKa = 6.83EE487 pKa = 3.95ILALQASYY495 pKa = 11.06INEE498 pKa = 3.54IKK500 pKa = 8.11MTYY503 pKa = 10.39KK504 pKa = 10.7DD505 pKa = 3.48FSEE508 pKa = 4.75AYY510 pKa = 8.7KK511 pKa = 10.7HH512 pKa = 5.01KK513 pKa = 9.39TRR515 pKa = 11.84SNVSLEE521 pKa = 4.06KK522 pKa = 10.13RR523 pKa = 11.84WNEE526 pKa = 3.22AGIRR530 pKa = 11.84EE531 pKa = 4.32FVTCGLMLL539 pKa = 4.57

Molecular weight: 62.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A7E7V5|A0A0A7E7V5_9REOV Uncharacterized protein OS=Dendrolimus punctatus cypovirus 22 OX=1577776 PE=4 SV=1
MM1 pKa = 7.47KK2 pKa = 9.79KK3 pKa = 10.12KK4 pKa = 10.71SPASPLEE11 pKa = 4.16TLQSTMLDD19 pKa = 3.58CAKK22 pKa = 10.69LFDD25 pKa = 4.02RR26 pKa = 11.84TSKK29 pKa = 10.41FSKK32 pKa = 10.12AQRR35 pKa = 11.84LLAASLKK42 pKa = 10.34LIAEE46 pKa = 4.66IMPDD50 pKa = 2.77IPDD53 pKa = 3.22RR54 pKa = 11.84HH55 pKa = 5.84FPAIRR60 pKa = 11.84KK61 pKa = 5.72YY62 pKa = 9.19TKK64 pKa = 9.2ATKK67 pKa = 10.36NLATTAIKK75 pKa = 10.48NHH77 pKa = 6.31SLTQAKK83 pKa = 10.07AKK85 pKa = 10.28LIRR88 pKa = 11.84EE89 pKa = 3.85EE90 pKa = 4.35RR91 pKa = 11.84YY92 pKa = 9.9NDD94 pKa = 3.57RR95 pKa = 11.84VCIPNARR102 pKa = 11.84QVAATGDD109 pKa = 3.69YY110 pKa = 10.32QRR112 pKa = 11.84TSVVVRR118 pKa = 11.84STLRR122 pKa = 11.84ATLNDD127 pKa = 3.55VNDD130 pKa = 4.15FTANIEE136 pKa = 4.14YY137 pKa = 9.75HH138 pKa = 6.98RR139 pKa = 11.84KK140 pKa = 8.55RR141 pKa = 11.84QTVPEE146 pKa = 4.13LQRR149 pKa = 11.84EE150 pKa = 4.31LRR152 pKa = 11.84RR153 pKa = 11.84MNEE156 pKa = 3.86TLAEE160 pKa = 4.17LPALVQQGYY169 pKa = 8.96NRR171 pKa = 11.84YY172 pKa = 9.12CDD174 pKa = 3.99EE175 pKa = 4.71LRR177 pKa = 11.84HH178 pKa = 4.7PTIWKK183 pKa = 8.11QKK185 pKa = 8.93KK186 pKa = 8.0RR187 pKa = 11.84QKK189 pKa = 9.23EE190 pKa = 4.09TLTKK194 pKa = 10.39LEE196 pKa = 3.82KK197 pKa = 10.33SEE199 pKa = 4.43RR200 pKa = 11.84DD201 pKa = 3.2RR202 pKa = 11.84KK203 pKa = 10.82AKK205 pKa = 10.35FQVKK209 pKa = 9.6GGAGMWQRR217 pKa = 11.84LRR219 pKa = 11.84QQKK222 pKa = 10.04

Molecular weight: 25.81 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16

0

16

9936

222

1312

621.0

70.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.958 ± 0.173

1.329 ± 0.204

5.847 ± 0.211

5.304 ± 0.18

4.136 ± 0.258

4.64 ± 0.187

3.09 ± 0.183

7.377 ± 0.318

4.469 ± 0.471

9.541 ± 0.285

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.526 ± 0.162

5.435 ± 0.201

4.68 ± 0.281

4.147 ± 0.184

6.079 ± 0.329

6.924 ± 0.294

7.146 ± 0.362

6.159 ± 0.2

0.896 ± 0.069

4.318 ± 0.248
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski