Mandrillus leucophaeus cytomegalovirus

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Cytomegalovirus; Mandrilline betaherpesvirus 1

Average proteome isoelectric point is 7.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 81 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0G2UPC3|A0A0G2UPC3_SCMVC Envelope glycoprotein M OS=Mandrillus leucophaeus cytomegalovirus OX=1654930 GN=UL100 PE=3 SV=1
MM1 pKa = 6.96RR2 pKa = 11.84QAMRR6 pKa = 11.84GRR8 pKa = 11.84VLLVALFAITGGTAVAANNTTTTNASTSTAVITTTVPTSSTNTTTATTSPATTNVSSASPASSPATTNSTQTTATSSSTIISSSSAVTTGVTTSTSSNNTSITTASNSTSATNTNGTVTPTSEE131 pKa = 4.62LNVTTTVDD139 pKa = 3.11STTDD143 pKa = 3.35YY144 pKa = 11.77SNEE147 pKa = 4.08TFNATTPDD155 pKa = 4.32PYY157 pKa = 11.0TPLQIVDD164 pKa = 4.52LCNEE168 pKa = 4.47TIAIVFRR175 pKa = 11.84DD176 pKa = 3.46EE177 pKa = 5.07DD178 pKa = 4.14GEE180 pKa = 4.15PEE182 pKa = 4.11EE183 pKa = 4.39NSRR186 pKa = 11.84SSEE189 pKa = 4.14EE190 pKa = 3.97ADD192 pKa = 3.19SKK194 pKa = 11.46YY195 pKa = 11.15DD196 pKa = 3.69SNEE199 pKa = 3.56DD200 pKa = 3.03TTYY203 pKa = 10.33FPQGPGYY210 pKa = 8.32TLSSDD215 pKa = 3.61SDD217 pKa = 3.74DD218 pKa = 5.42AIYY221 pKa = 9.63FYY223 pKa = 11.59ANCEE227 pKa = 4.25RR228 pKa = 11.84NDD230 pKa = 3.21TSQNVTSCNYY240 pKa = 8.96TNQPLTSWSLVTSVSFYY257 pKa = 10.42PAEE260 pKa = 4.04LTNCKK265 pKa = 10.08QPVAVIQVGNNSLVVSAEE283 pKa = 3.92ATSNLVDD290 pKa = 5.4AIYY293 pKa = 10.63KK294 pKa = 10.13VLGFPDD300 pKa = 4.32LSSSFLKK307 pKa = 10.72EE308 pKa = 3.6LGKK311 pKa = 9.97FQHH314 pKa = 7.14LIIQGQTEE322 pKa = 3.99RR323 pKa = 11.84QKK325 pKa = 10.65WVTVEE330 pKa = 3.75

Molecular weight: 34.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0G2UGL5|A0A0G2UGL5_SCMVC DNA replication helicase OS=Mandrillus leucophaeus cytomegalovirus OX=1654930 GN=UL105 PE=3 SV=1
MM1 pKa = 7.56VLYY4 pKa = 9.78QYY6 pKa = 11.29RR7 pKa = 11.84NAVQLLSARR16 pKa = 11.84PRR18 pKa = 11.84DD19 pKa = 3.8GPGRR23 pKa = 11.84WEE25 pKa = 4.17RR26 pKa = 11.84LTHH29 pKa = 5.79HH30 pKa = 7.14AAYY33 pKa = 8.64TADD36 pKa = 4.08HH37 pKa = 6.57GACTVLMATSQRR49 pKa = 11.84RR50 pKa = 11.84SLVLRR55 pKa = 11.84RR56 pKa = 11.84HH57 pKa = 5.15SAISAVTLRR66 pKa = 11.84LIPDD70 pKa = 4.68KK71 pKa = 10.52ILKK74 pKa = 9.81KK75 pKa = 10.71LEE77 pKa = 3.86VSDD80 pKa = 4.06WVPGAWIASEE90 pKa = 4.25TFPTSDD96 pKa = 3.28ISGLRR101 pKa = 3.39

Molecular weight: 11.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

81

0

81

34073

56

1343

420.7

47.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.102 ± 0.221

2.533 ± 0.131

4.995 ± 0.18

5.206 ± 0.208

4.153 ± 0.138

4.746 ± 0.199

3.24 ± 0.15

4.658 ± 0.164

3.601 ± 0.215

10.043 ± 0.245

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.374 ± 0.117

4.027 ± 0.164

5.761 ± 0.269

3.686 ± 0.136

6.997 ± 0.255

7.739 ± 0.26

6.935 ± 0.352

7.237 ± 0.206

1.385 ± 0.11

3.581 ± 0.128
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski