Luteimonas marina

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteimonas

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3401 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5C5U2P4|A0A5C5U2P4_9GAMM Zinc metalloprotease OS=Luteimonas marina OX=488485 GN=rseP PE=3 SV=1
MM1 pKa = 7.07NRR3 pKa = 11.84IYY5 pKa = 10.86CKK7 pKa = 10.27VWNQSKK13 pKa = 10.07GQVTVASEE21 pKa = 3.85LAKK24 pKa = 10.87SKK26 pKa = 11.03GKK28 pKa = 10.91GKK30 pKa = 10.06GARR33 pKa = 11.84LLQAVVVGGAIAFAGAAAAHH53 pKa = 6.35GPGHH57 pKa = 5.49ATKK60 pKa = 9.95PGSKK64 pKa = 9.78GQQASKK70 pKa = 10.52SQAHH74 pKa = 6.19GGKK77 pKa = 8.46PHH79 pKa = 5.19VHH81 pKa = 6.49EE82 pKa = 4.82KK83 pKa = 10.96LPAKK87 pKa = 10.46VVDD90 pKa = 3.78ACGTAVASATGAMACGNDD108 pKa = 3.47AAASGAGSTAVGNAAKK124 pKa = 8.97ATHH127 pKa = 6.64ANATALGNNARR138 pKa = 11.84AQQSNATAVGSNALASGSAATALGGATQAIGLRR171 pKa = 11.84STAVGYY177 pKa = 9.62SAQAHH182 pKa = 6.07AEE184 pKa = 4.0GAIALGFNAYY194 pKa = 9.44VGPAATGSVALGYY207 pKa = 9.68GARR210 pKa = 11.84TTEE213 pKa = 3.96ANVFSVGNGGGAGTVGPATRR233 pKa = 11.84RR234 pKa = 11.84ITNVSDD240 pKa = 5.03GIADD244 pKa = 3.43SDD246 pKa = 4.03AATVGQVGEE255 pKa = 4.21VADD258 pKa = 4.21AVDD261 pKa = 4.39AVAEE265 pKa = 4.25LAEE268 pKa = 4.24HH269 pKa = 6.22TDD271 pKa = 3.38RR272 pKa = 11.84YY273 pKa = 10.25FKK275 pKa = 11.18ADD277 pKa = 3.48GADD280 pKa = 3.98DD281 pKa = 4.8GSDD284 pKa = 3.45DD285 pKa = 4.9ASISGDD291 pKa = 3.42GAVAAGAGATADD303 pKa = 3.86GAGATALGAGSQATNAYY320 pKa = 7.17ATAVGNEE327 pKa = 3.81ASASGLQSTAAGFRR341 pKa = 11.84SDD343 pKa = 3.47ASGDD347 pKa = 3.32ASSAYY352 pKa = 9.98GGYY355 pKa = 9.97SVASGFGTSAFGYY368 pKa = 9.66GAEE371 pKa = 4.27AVLDD375 pKa = 4.03GATALGFGAVAGGYY389 pKa = 10.48DD390 pKa = 3.45SVAVGEE396 pKa = 4.41SALASGEE403 pKa = 3.87NSVAVGGAFWGLLPTEE419 pKa = 4.27AAGDD423 pKa = 3.76YY424 pKa = 8.55STAVGGAAYY433 pKa = 10.13AGGFNSTAIGNFSSAEE449 pKa = 4.0GDD451 pKa = 3.28SSLALGSDD459 pKa = 3.56SVALGEE465 pKa = 4.31GSVALGQGAYY475 pKa = 10.29ADD477 pKa = 3.73RR478 pKa = 11.84DD479 pKa = 3.97YY480 pKa = 10.85TVSVGDD486 pKa = 3.55VGAEE490 pKa = 3.64RR491 pKa = 11.84QITNVAAGTEE501 pKa = 4.26GTDD504 pKa = 3.83AVNVDD509 pKa = 3.65QLEE512 pKa = 4.08EE513 pKa = 3.96ATASNRR519 pKa = 11.84YY520 pKa = 8.0FQATGNDD527 pKa = 4.31DD528 pKa = 4.67DD529 pKa = 5.52PSDD532 pKa = 4.27DD533 pKa = 3.34VGAYY537 pKa = 10.31AEE539 pKa = 4.34GAYY542 pKa = 8.82ATASGEE548 pKa = 3.97ATNAIGQGASAYY560 pKa = 10.42GSGAYY565 pKa = 9.97AEE567 pKa = 4.75GLNATASGYY576 pKa = 10.47NATATADD583 pKa = 3.26GATAVGGSLYY593 pKa = 11.03YY594 pKa = 10.27EE595 pKa = 4.91DD596 pKa = 4.35PTTGEE601 pKa = 4.11VLLDD605 pKa = 3.47QTTTASAVGASAYY618 pKa = 10.36GAGAQANGAFSTASGAAATADD639 pKa = 3.88GLQSSASGYY648 pKa = 10.62SSAASGDD655 pKa = 3.69YY656 pKa = 7.7TTATGSFSNAAGYY669 pKa = 10.08GGSALGYY676 pKa = 9.18GAEE679 pKa = 4.18ASGDD683 pKa = 3.57YY684 pKa = 9.18ATAVGVVATASGVSSVAVGEE704 pKa = 4.24FSEE707 pKa = 4.45ATGDD711 pKa = 3.44EE712 pKa = 4.47SVAVGGSTFFGFIPAQASGTGATAVGAGAWATGDD746 pKa = 3.52YY747 pKa = 8.55GTALGWNSWANAEE760 pKa = 4.27SATALGEE767 pKa = 4.27SATASAANSVALGAGSLADD786 pKa = 3.92RR787 pKa = 11.84EE788 pKa = 4.54NTVSVGSAGAEE799 pKa = 3.46RR800 pKa = 11.84QVTNVAAGTEE810 pKa = 4.1ATDD813 pKa = 4.26AVNLEE818 pKa = 4.09QLEE821 pKa = 4.39EE822 pKa = 4.26ATQHH826 pKa = 4.77TRR828 pKa = 11.84YY829 pKa = 9.15FAASGGADD837 pKa = 3.77SDD839 pKa = 3.44NGAYY843 pKa = 10.25VEE845 pKa = 4.42GDD847 pKa = 3.52YY848 pKa = 10.57ATAAGEE854 pKa = 4.12SATAVGEE861 pKa = 4.31GASALGSGAFALADD875 pKa = 3.44YY876 pKa = 8.05ATAVGFNAVADD887 pKa = 3.9QASAVAVGASSTALGEE903 pKa = 4.02YY904 pKa = 9.97AVAVGSEE911 pKa = 4.1SFAEE915 pKa = 4.98GFASTATGAAAMAVGEE931 pKa = 4.32GSTAAGALATASGIEE946 pKa = 4.2STAVGAFAEE955 pKa = 4.45ATGDD959 pKa = 3.56LATAAGAEE967 pKa = 4.51SVASGNEE974 pKa = 3.73SSAFGALSEE983 pKa = 4.47ASGHH987 pKa = 5.63YY988 pKa = 8.36ATAVGARR995 pKa = 11.84ADD997 pKa = 3.33ASGFNSTSLGSWSTASGFNATAVGADD1023 pKa = 3.62SVASGDD1029 pKa = 3.71DD1030 pKa = 3.51SLAVGQAAIASGAEE1044 pKa = 4.12SVAVGGSSLSGFFPTEE1060 pKa = 3.34ASGDD1064 pKa = 3.67YY1065 pKa = 9.2ATAVGAGAWAVGTNSTALGNFATAEE1090 pKa = 4.44GEE1092 pKa = 4.04DD1093 pKa = 3.87STALGVGSYY1102 pKa = 10.91ASADD1106 pKa = 3.35NSVALGVGSEE1116 pKa = 4.15ADD1118 pKa = 3.57RR1119 pKa = 11.84EE1120 pKa = 4.74GTVSVGSVGSEE1131 pKa = 3.5RR1132 pKa = 11.84QITNVAAGTEE1142 pKa = 4.23GTDD1145 pKa = 4.01AVNLEE1150 pKa = 4.07QLEE1153 pKa = 4.23EE1154 pKa = 4.2ATASTRR1160 pKa = 11.84YY1161 pKa = 8.8FQATGNDD1168 pKa = 4.31DD1169 pKa = 4.67DD1170 pKa = 5.52PSDD1173 pKa = 4.27DD1174 pKa = 3.34VGAYY1178 pKa = 10.26AEE1180 pKa = 4.4GTYY1183 pKa = 9.32ATASGEE1189 pKa = 3.99ATNAIGQGASAYY1201 pKa = 10.42GSGAYY1206 pKa = 9.97AEE1208 pKa = 4.75GLNATASGYY1217 pKa = 10.47NATATADD1224 pKa = 3.26GATAVGGSLYY1234 pKa = 11.03YY1235 pKa = 10.27EE1236 pKa = 4.91DD1237 pKa = 4.35PTTGEE1242 pKa = 4.11VLLDD1246 pKa = 3.47QTTTASAVGASAFGAGAQANGAFSTASGAAATADD1280 pKa = 3.75GLQATAIGYY1289 pKa = 9.94SSTSSGLAATSLGGFSEE1306 pKa = 4.31ATGDD1310 pKa = 3.46FSTALGYY1317 pKa = 10.21GAAASNTRR1325 pKa = 11.84TTAVGITSTASGLNATAVGNTSTASGNASAALGSSSNATGLNATALGASAWATADD1380 pKa = 3.2NATSVGQLAWATVAGGTAIGRR1401 pKa = 11.84DD1402 pKa = 3.49AYY1404 pKa = 11.38VYY1406 pKa = 10.5GAGVNATAVGLSAWANGASSVALGAGARR1434 pKa = 11.84ATEE1437 pKa = 4.18EE1438 pKa = 4.08NVVSVGNGTGAGGHH1452 pKa = 6.41PATRR1456 pKa = 11.84RR1457 pKa = 11.84IVNVGDD1463 pKa = 3.64GVAASDD1469 pKa = 3.66AATVGQLEE1477 pKa = 4.24AVTEE1481 pKa = 4.11HH1482 pKa = 5.51TRR1484 pKa = 11.84YY1485 pKa = 9.17FAASGGADD1493 pKa = 3.67SDD1495 pKa = 3.59NAAYY1499 pKa = 10.84VEE1501 pKa = 4.17GDD1503 pKa = 3.57YY1504 pKa = 10.55ATAAGEE1510 pKa = 4.12SATAVGEE1517 pKa = 4.31GASALGSGAFALAEE1531 pKa = 3.92RR1532 pKa = 11.84ATAVGFNASAGGVDD1546 pKa = 4.3AVALGASASAIGDD1559 pKa = 3.56GSVVLGAGAVSWGSGAVAVGSGGTANADD1587 pKa = 2.98AATAVGGFANAAGTNSVAVGSGAVSLGDD1615 pKa = 3.44HH1616 pKa = 5.72STALGADD1623 pKa = 3.73AFAEE1627 pKa = 4.27ADD1629 pKa = 3.62GSVALGQGSVADD1641 pKa = 4.17RR1642 pKa = 11.84ANTVSVGSAGSEE1654 pKa = 3.63RR1655 pKa = 11.84QITNVAAGRR1664 pKa = 11.84IALGSTDD1671 pKa = 4.07AVTGGQVYY1679 pKa = 10.33DD1680 pKa = 4.54ALDD1683 pKa = 3.43STAQILGGGAGVTAFGTLSAPAYY1706 pKa = 7.68MIQGRR1711 pKa = 11.84TYY1713 pKa = 10.6FSVGDD1718 pKa = 3.52AFGAVDD1724 pKa = 3.69AQISVLGNRR1733 pKa = 11.84LNSLEE1738 pKa = 4.15ASSMASEE1745 pKa = 4.48NSTASAAASRR1755 pKa = 11.84RR1756 pKa = 11.84TGNGIDD1762 pKa = 4.43NGDD1765 pKa = 3.58ATDD1768 pKa = 3.86GGLVHH1773 pKa = 7.46DD1774 pKa = 5.58RR1775 pKa = 11.84GTDD1778 pKa = 3.31TVGSGRR1784 pKa = 11.84AGGTQVVDD1792 pKa = 3.7TATSTAVTVGQGAVATQATATAIGDD1817 pKa = 3.94GATATAAGSVALGQGSVADD1836 pKa = 4.17RR1837 pKa = 11.84ANTVSVGSAGNEE1849 pKa = 3.59RR1850 pKa = 11.84QITNVAAGTQSTDD1863 pKa = 3.02AVNVAQLEE1871 pKa = 4.56STATQAVADD1880 pKa = 4.25ANAYY1884 pKa = 8.11TDD1886 pKa = 3.48QKK1888 pKa = 10.78FSAWSDD1894 pKa = 3.38SFSAYY1899 pKa = 7.38QTQLEE1904 pKa = 4.28QRR1906 pKa = 11.84FTDD1909 pKa = 3.04QDD1911 pKa = 3.22RR1912 pKa = 11.84RR1913 pKa = 11.84IDD1915 pKa = 3.45RR1916 pKa = 11.84QGAMGAAMLNMATSAAGIRR1935 pKa = 11.84TQNRR1939 pKa = 11.84VGVGVGFQGGQSALSLGYY1957 pKa = 10.06QRR1959 pKa = 11.84AISDD1963 pKa = 3.79RR1964 pKa = 11.84ATLTLGGAFSGDD1976 pKa = 3.49EE1977 pKa = 3.95KK1978 pKa = 11.26SVGVGAGFGWW1988 pKa = 3.55

Molecular weight: 188.06 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5C5UB04|A0A5C5UB04_9GAMM Protease 4 OS=Luteimonas marina OX=488485 GN=sppA PE=3 SV=1
MM1 pKa = 7.09TRR3 pKa = 11.84SATPRR8 pKa = 11.84PTAQADD14 pKa = 3.54ALRR17 pKa = 11.84TLEE20 pKa = 4.28HH21 pKa = 6.92LLLGALFLGAIAMLSLPAARR41 pKa = 11.84GASATLGWMPLWLLGLPAASLATAFALRR69 pKa = 11.84LSRR72 pKa = 11.84RR73 pKa = 11.84VAMQAPSSAPRR84 pKa = 11.84RR85 pKa = 11.84RR86 pKa = 11.84RR87 pKa = 11.84PATFAATRR95 pKa = 11.84RR96 pKa = 11.84RR97 pKa = 11.84TGAPRR102 pKa = 11.84RR103 pKa = 11.84ASRR106 pKa = 11.84LLAAIVLRR114 pKa = 4.48

Molecular weight: 12.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3401

0

3401

1148263

41

1988

337.6

36.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.489 ± 0.066

0.792 ± 0.012

6.188 ± 0.037

5.461 ± 0.036

3.395 ± 0.026

8.864 ± 0.037

2.216 ± 0.022

4.066 ± 0.03

2.496 ± 0.027

10.678 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.078 ± 0.019

2.294 ± 0.025

5.522 ± 0.032

3.383 ± 0.026

8.099 ± 0.048

4.961 ± 0.03

4.7 ± 0.029

7.5 ± 0.037

1.567 ± 0.017

2.25 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski