Candidatus Jettenia caeni

Taxonomy: cellular organisms; Bacteria; PVC group; Planctomycetes; Candidatus Brocadiae; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Jettenia

Average proteome isoelectric point is 7.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3545 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I3IM23|I3IM23_9BACT Uncharacterized protein OS=Candidatus Jettenia caeni OX=247490 GN=KSU1_C1172 PE=4 SV=1
MM1 pKa = 7.53LPKK4 pKa = 10.09ILPSVLTMPFAVVLASLLFIVNLATAALPSYY35 pKa = 10.48DD36 pKa = 3.62LQIYY40 pKa = 8.82KK41 pKa = 10.35QGTWYY46 pKa = 9.56TGIAMEE52 pKa = 6.39DD53 pKa = 3.3IDD55 pKa = 4.93NDD57 pKa = 3.76GGLEE61 pKa = 3.93IIIGNRR67 pKa = 11.84NTSSAEE73 pKa = 3.1IWKK76 pKa = 10.35YY77 pKa = 10.64NVSTQTLNQTASISFPYY94 pKa = 9.66HH95 pKa = 5.21IHH97 pKa = 7.63DD98 pKa = 3.65IVAVDD103 pKa = 3.88VDD105 pKa = 3.7HH106 pKa = 7.67DD107 pKa = 4.15GQKK110 pKa = 10.68EE111 pKa = 4.08IIVGIRR117 pKa = 11.84FEE119 pKa = 4.42GLYY122 pKa = 8.88MARR125 pKa = 11.84FSGSAWNVTQIADD138 pKa = 4.11GYY140 pKa = 7.5TWQVLAADD148 pKa = 4.71FNGDD152 pKa = 3.35GHH154 pKa = 8.34VDD156 pKa = 3.03ICQGLDD162 pKa = 2.85HH163 pKa = 7.13AYY165 pKa = 9.78IRR167 pKa = 11.84IFYY170 pKa = 9.57GNGVGGFTLGSSPPLEE186 pKa = 4.03RR187 pKa = 11.84QLGNGWGMNAIDD199 pKa = 4.7LNSDD203 pKa = 2.97GRR205 pKa = 11.84LDD207 pKa = 4.66LIGVVPQWPDD217 pKa = 3.47GIGTGYY223 pKa = 10.48FLRR226 pKa = 11.84AHH228 pKa = 6.99LNLDD232 pKa = 3.27AGGQVTWNSVGPTAPLSYY250 pKa = 10.47DD251 pKa = 3.28QNRR254 pKa = 11.84AQAFLSNSAADD265 pKa = 3.43IDD267 pKa = 4.29GNGYY271 pKa = 9.38IDD273 pKa = 3.47QAVFFANGRR282 pKa = 11.84VSIYY286 pKa = 9.53MGSSSGGQLVWTEE299 pKa = 3.79QQIAQLPTTDD309 pKa = 6.49FIDD312 pKa = 3.58QPSIGISDD320 pKa = 3.77VNNDD324 pKa = 2.87GFLDD328 pKa = 3.53VHH330 pKa = 7.69VDD332 pKa = 3.55GGADD336 pKa = 3.54FNGMVVFLGDD346 pKa = 3.53GTGMYY351 pKa = 8.09QQKK354 pKa = 8.18TLILDD359 pKa = 3.45HH360 pKa = 7.04GIGGFLNSTRR370 pKa = 11.84FGDD373 pKa = 3.72INGDD377 pKa = 3.74GYY379 pKa = 9.69TDD381 pKa = 3.27ICAVRR386 pKa = 11.84FMGNSYY392 pKa = 11.27AGFDD396 pKa = 3.67VLYY399 pKa = 7.85QTPPSNLPPVANAGTDD415 pKa = 3.45QSVHH419 pKa = 5.54VGNTVMLNGSGSSDD433 pKa = 3.53PNGDD437 pKa = 3.71LLTYY441 pKa = 10.43NWTFISKK448 pKa = 9.91PGGSSATLSDD458 pKa = 3.71PTLVNPTFTVDD469 pKa = 2.85KK470 pKa = 10.91AGTYY474 pKa = 9.22KK475 pKa = 10.78VKK477 pKa = 10.79LVVNDD482 pKa = 3.81GTVDD486 pKa = 3.67SVADD490 pKa = 3.64TVLISTINVKK500 pKa = 9.99PVANAGDD507 pKa = 3.9DD508 pKa = 3.37QSVYY512 pKa = 10.76VGSLVTLDD520 pKa = 4.25GSGSSDD526 pKa = 3.41PDD528 pKa = 3.54GDD530 pKa = 3.57QVTYY534 pKa = 10.92NWAFQSKK541 pKa = 8.43PQNSSATLNNPTSASPTFTVDD562 pKa = 2.64KK563 pKa = 10.87AGTYY567 pKa = 7.84VVKK570 pKa = 11.02LIVNDD575 pKa = 4.01GALNSDD581 pKa = 4.18PDD583 pKa = 3.84TVTISNINVAPVADD597 pKa = 4.1AGMDD601 pKa = 3.49QAITTIGTTVQLDD614 pKa = 3.66GTQSYY619 pKa = 11.1DD620 pKa = 3.42PDD622 pKa = 4.69GDD624 pKa = 4.58PITYY628 pKa = 9.21QWAFTSIPDD637 pKa = 3.52GSTASLADD645 pKa = 4.14ADD647 pKa = 4.32TATPTFTADD656 pKa = 2.98VHH658 pKa = 6.98GEE660 pKa = 4.13YY661 pKa = 10.55VVQLVVKK668 pKa = 9.13DD669 pKa = 3.93TSLLSAQDD677 pKa = 3.35AVVISFTNIKK687 pKa = 9.5PVANAGTSQSAVVGDD702 pKa = 3.77TVTINGSGSTDD713 pKa = 3.08GNGDD717 pKa = 3.34NLTYY721 pKa = 10.09QWSFSSVPDD730 pKa = 3.8GSNAEE735 pKa = 4.14IAGPTAITTTFVPDD749 pKa = 3.21KK750 pKa = 10.54AGTYY754 pKa = 9.32VVQLVVNDD762 pKa = 5.58GIVDD766 pKa = 4.0SDD768 pKa = 3.93PSTVQVQVIDD778 pKa = 3.95EE779 pKa = 4.05QTAAIQAIQDD789 pKa = 3.99CEE791 pKa = 3.95QVIASLNSNVFKK803 pKa = 10.59NANMQNTLINKK814 pKa = 9.18LNAVIANIEE823 pKa = 3.97AGNYY827 pKa = 8.86EE828 pKa = 4.28DD829 pKa = 6.22ALGQLRR835 pKa = 11.84NDD837 pKa = 3.58VLGKK841 pKa = 9.1TDD843 pKa = 3.08GCADD847 pKa = 3.6SGSPDD852 pKa = 3.33KK853 pKa = 11.39NDD855 pKa = 3.82WIKK858 pKa = 11.41DD859 pKa = 3.5CAAQGSVYY867 pKa = 10.43PCIQHH872 pKa = 6.86AIVVVEE878 pKa = 3.94GLL880 pKa = 3.55

Molecular weight: 92.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I3IH07|I3IH07_9BACT Gas vesicle structural protein OS=Candidatus Jettenia caeni OX=247490 GN=KSU1_B0145 PE=3 SV=1
MM1 pKa = 7.42KK2 pKa = 10.72VNIRR6 pKa = 11.84KK7 pKa = 9.66SSIKK11 pKa = 9.61HH12 pKa = 5.21KK13 pKa = 10.38RR14 pKa = 11.84MCGFRR19 pKa = 11.84KK20 pKa = 9.96RR21 pKa = 11.84MRR23 pKa = 11.84TKK25 pKa = 10.35GGRR28 pKa = 11.84AILKK32 pKa = 8.33RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84IGRR39 pKa = 11.84RR40 pKa = 11.84PLLDD44 pKa = 3.21VV45 pKa = 4.01

Molecular weight: 5.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3545

0

3545

1108176

37

3982

312.6

35.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.453 ± 0.032

1.299 ± 0.02

5.24 ± 0.039

6.824 ± 0.048

4.485 ± 0.033

6.765 ± 0.043

2.241 ± 0.021

8.569 ± 0.046

7.403 ± 0.049

9.294 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.378 ± 0.02

4.467 ± 0.028

3.958 ± 0.027

3.196 ± 0.023

4.873 ± 0.032

6.095 ± 0.039

5.424 ± 0.044

6.364 ± 0.036

1.073 ± 0.016

3.598 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski