Beihai sobemo-like virus 18

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 5.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KEB3|A0A1L3KEB3_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 18 OX=1922689 PE=4 SV=1
MM1 pKa = 7.39LKK3 pKa = 10.12ISGEE7 pKa = 3.92AADD10 pKa = 3.9QDD12 pKa = 3.79IEE14 pKa = 4.49VFDD17 pKa = 4.88ASPVMSRR24 pKa = 11.84MTPAQRR30 pKa = 11.84RR31 pKa = 11.84DD32 pKa = 3.56KK33 pKa = 10.54YY34 pKa = 11.72KK35 pKa = 10.75MMADD39 pKa = 3.81CEE41 pKa = 4.38DD42 pKa = 3.64VVVPMLQNVCSEE54 pKa = 4.56DD55 pKa = 3.58VPPDD59 pKa = 3.48YY60 pKa = 11.24LSFVAPNKK68 pKa = 9.85PLVDD72 pKa = 4.97EE73 pKa = 4.89IRR75 pKa = 11.84SQLGIEE81 pKa = 4.5FPLLTSDD88 pKa = 3.88EE89 pKa = 4.57SFGTLISTKK98 pKa = 9.33TSSGHH103 pKa = 5.0VLNPDD108 pKa = 3.46SSSGHH113 pKa = 5.01YY114 pKa = 7.02WAKK117 pKa = 10.47YY118 pKa = 7.58GANNGEE124 pKa = 4.15VFGWSPEE131 pKa = 3.71KK132 pKa = 10.7ARR134 pKa = 11.84YY135 pKa = 7.28TGEE138 pKa = 4.0NRR140 pKa = 11.84LSDD143 pKa = 3.96ANMIALFRR151 pKa = 11.84EE152 pKa = 4.52KK153 pKa = 10.37VVSRR157 pKa = 11.84MVEE160 pKa = 4.09LYY162 pKa = 10.25FMPVSDD168 pKa = 4.43VIKK171 pKa = 10.65VFIKK175 pKa = 10.63HH176 pKa = 5.9EE177 pKa = 3.83PHH179 pKa = 6.61KK180 pKa = 10.33PEE182 pKa = 4.58KK183 pKa = 10.25VKK185 pKa = 10.48QGKK188 pKa = 7.33WRR190 pKa = 11.84LIMGVCPTDD199 pKa = 3.36QICAHH204 pKa = 6.81LLFDD208 pKa = 3.67TVLAIFEE215 pKa = 4.93SIPLLSGTAIGWSPMMEE232 pKa = 4.21GGVSLYY238 pKa = 10.02RR239 pKa = 11.84AYY241 pKa = 11.02VGDD244 pKa = 4.16YY245 pKa = 11.64NMVTADD251 pKa = 3.68RR252 pKa = 11.84SSWDD256 pKa = 2.97WTVQFWLALTFISLMLYY273 pKa = 10.23LCNTRR278 pKa = 11.84SLLRR282 pKa = 11.84QRR284 pKa = 11.84IITNHH289 pKa = 5.69ILSMFGSRR297 pKa = 11.84KK298 pKa = 9.42FNVGASTFYY307 pKa = 9.88MHH309 pKa = 7.38ILGVLLSGWKK319 pKa = 8.16LTAFCNSLMQIICHH333 pKa = 6.2HH334 pKa = 6.58LACLAVGFQLPPPICMGDD352 pKa = 3.42DD353 pKa = 3.52TLQNDD358 pKa = 5.33PITYY362 pKa = 8.5MRR364 pKa = 11.84LFSNVLDD371 pKa = 4.6DD372 pKa = 4.2VDD374 pKa = 4.05PVAVDD379 pKa = 3.43RR380 pKa = 11.84EE381 pKa = 4.27YY382 pKa = 10.78WKK384 pKa = 10.78FLSSTGAILKK394 pKa = 9.2MVDD397 pKa = 2.87RR398 pKa = 11.84FEE400 pKa = 5.78DD401 pKa = 3.78YY402 pKa = 11.35SEE404 pKa = 4.28FCGFRR409 pKa = 11.84FIPGEE414 pKa = 4.33CYY416 pKa = 9.22PVYY419 pKa = 10.21DD420 pKa = 3.95VKK422 pKa = 11.12HH423 pKa = 5.8AVALHH428 pKa = 5.31NVPSEE433 pKa = 4.08FLHH436 pKa = 5.33STLRR440 pKa = 11.84SYY442 pKa = 11.36LWLYY446 pKa = 10.9CYY448 pKa = 10.72DD449 pKa = 3.65KK450 pKa = 11.05EE451 pKa = 4.75KK452 pKa = 11.53YY453 pKa = 8.49EE454 pKa = 4.3ALEE457 pKa = 3.61RR458 pKa = 11.84WLRR461 pKa = 11.84QTGGSTSFTRR471 pKa = 11.84LKK473 pKa = 10.42ILSQINGVAPPCIRR487 pKa = 11.84PLTWAA492 pKa = 4.13

Molecular weight:
55.89 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KEB3|A0A1L3KEB3_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 18 OX=1922689 PE=4 SV=1
MM1 pKa = 6.72NTSALFAEE9 pKa = 4.43FLEE12 pKa = 4.09YY13 pKa = 10.75RR14 pKa = 11.84KK15 pKa = 9.01MRR17 pKa = 11.84RR18 pKa = 11.84TMFQSSPLFEE28 pKa = 4.12WFEE31 pKa = 4.01LFIVKK36 pKa = 10.28AEE38 pKa = 4.11SLSRR42 pKa = 11.84MFDD45 pKa = 2.99IGKK48 pKa = 8.08MIPMALTVSSLSLSLCMMLHH68 pKa = 6.74GLALLLNVRR77 pKa = 11.84SRR79 pKa = 11.84ITSFLSSIFRR89 pKa = 11.84TLRR92 pKa = 11.84YY93 pKa = 9.86VLTRR97 pKa = 11.84LLPGVRR103 pKa = 11.84TYY105 pKa = 10.51LTVIALVVLCLGTLHH120 pKa = 7.3IALEE124 pKa = 4.36CFDD127 pKa = 4.3AFFVEE132 pKa = 5.54VPDD135 pKa = 3.85EE136 pKa = 4.16MEE138 pKa = 4.45PPVDD142 pKa = 3.34ISDD145 pKa = 3.58VSVATVSVLLICVGSYY161 pKa = 11.39ALLIWTNLDD170 pKa = 3.66RR171 pKa = 11.84LVLDD175 pKa = 3.46YY176 pKa = 11.28SYY178 pKa = 11.73VSSEE182 pKa = 3.82AAKK185 pKa = 10.7QIDD188 pKa = 4.4PNLMPGSVAMNDD200 pKa = 3.86PKK202 pKa = 10.81WLVTVGARR210 pKa = 11.84IGNMYY215 pKa = 9.25TIVGQAFQINQSYY228 pKa = 9.98VEE230 pKa = 4.04DD231 pKa = 4.8EE232 pKa = 3.72IWFITARR239 pKa = 11.84HH240 pKa = 4.87VVNHH244 pKa = 6.22IKK246 pKa = 10.55SYY248 pKa = 11.19DD249 pKa = 3.61NSIVTILTSTGKK261 pKa = 9.56PLTPIKK267 pKa = 10.08QVQLSDD273 pKa = 4.0SLPDD277 pKa = 3.55CMLLIVARR285 pKa = 11.84PKK287 pKa = 10.17GWNEE291 pKa = 3.66VGLKK295 pKa = 10.27VVDD298 pKa = 4.15PPFPSLSTDD307 pKa = 4.16FVCPVSIYY315 pKa = 10.97ARR317 pKa = 11.84DD318 pKa = 3.6VPEE321 pKa = 3.9QFQVRR326 pKa = 11.84ASRR329 pKa = 11.84GKK331 pKa = 10.31AGYY334 pKa = 8.98LVKK337 pKa = 10.58NAGMILHH344 pKa = 6.53HH345 pKa = 6.69TADD348 pKa = 4.37TVPGWSGSPILVTGDD363 pKa = 3.25EE364 pKa = 4.59GKK366 pKa = 10.81LEE368 pKa = 3.83VMGIHH373 pKa = 6.84LCCSGQTNNASRR385 pKa = 11.84NMGYY389 pKa = 11.02ALNAVLEE396 pKa = 4.75AYY398 pKa = 10.08VKK400 pKa = 9.42STYY403 pKa = 10.75GGVGNTVSQPVKK415 pKa = 10.61HH416 pKa = 6.02EE417 pKa = 4.19LVTEE421 pKa = 3.87ARR423 pKa = 11.84GRR425 pKa = 11.84PRR427 pKa = 11.84GRR429 pKa = 11.84PRR431 pKa = 11.84TRR433 pKa = 11.84RR434 pKa = 11.84VKK436 pKa = 10.61RR437 pKa = 11.84EE438 pKa = 3.91NKK440 pKa = 8.89SKK442 pKa = 10.79RR443 pKa = 11.84VFDD446 pKa = 3.7EE447 pKa = 4.32LYY449 pKa = 10.67NRR451 pKa = 11.84LEE453 pKa = 4.19SRR455 pKa = 11.84TGLQISRR462 pKa = 11.84IDD464 pKa = 3.71EE465 pKa = 4.09EE466 pKa = 4.53GANYY470 pKa = 10.66DD471 pKa = 4.16LFEE474 pKa = 4.42EE475 pKa = 5.12CSRR478 pKa = 11.84SLDD481 pKa = 3.4ATFVNHH487 pKa = 7.18HH488 pKa = 6.18EE489 pKa = 4.29VCQYY493 pKa = 10.53GCQSPEE499 pKa = 3.72EE500 pKa = 4.41CPLCKK505 pKa = 10.34NQVEE509 pKa = 4.52ILCGRR514 pKa = 11.84CDD516 pKa = 3.19WDD518 pKa = 3.86DD519 pKa = 4.37RR520 pKa = 11.84YY521 pKa = 11.39AHH523 pKa = 7.36DD524 pKa = 5.1EE525 pKa = 4.23DD526 pKa = 5.66CAMCNTLTAVCMCITTFGGQVAFANHH552 pKa = 5.56PTRR555 pKa = 11.84VDD557 pKa = 3.51EE558 pKa = 4.6NGMPEE563 pKa = 4.93VLLLWFGSDD572 pKa = 3.84YY573 pKa = 11.37YY574 pKa = 10.47PATTVPFSLNIGIDD588 pKa = 3.56PQPFILHH595 pKa = 5.29KK596 pKa = 9.78TIGGEE601 pKa = 3.95AKK603 pKa = 10.35GKK605 pKa = 10.34NKK607 pKa = 10.42GKK609 pKa = 10.56GFRR612 pKa = 11.84NLNKK616 pKa = 10.16YY617 pKa = 10.09AGSTSPSVSDD627 pKa = 3.54PRR629 pKa = 11.84SFLSWFDD636 pKa = 3.83DD637 pKa = 4.03PEE639 pKa = 5.92ADD641 pKa = 3.21RR642 pKa = 11.84TAFSFFPTVLPNKK655 pKa = 9.61DD656 pKa = 3.34VMWIVRR662 pKa = 11.84DD663 pKa = 3.87NNSGRR668 pKa = 11.84TSTWEE673 pKa = 3.52SDD675 pKa = 3.69YY676 pKa = 11.56LSDD679 pKa = 5.25QIIGRR684 pKa = 11.84LKK686 pKa = 8.39TWVNAEE692 pKa = 3.98AKK694 pKa = 10.71SPVLTKK700 pKa = 10.79AILDD704 pKa = 3.84EE705 pKa = 5.09DD706 pKa = 3.96DD707 pKa = 4.06QFIALHH713 pKa = 6.61DD714 pKa = 5.17SILEE718 pKa = 4.11DD719 pKa = 3.36EE720 pKa = 5.43FYY722 pKa = 10.82TVLKK726 pKa = 10.04VRR728 pKa = 11.84SVPISDD734 pKa = 3.78SLEE737 pKa = 4.1DD738 pKa = 4.1DD739 pKa = 4.45RR740 pKa = 11.84IAVEE744 pKa = 4.94KK745 pKa = 10.75ALEE748 pKa = 4.3DD749 pKa = 3.16YY750 pKa = 10.34RR751 pKa = 11.84YY752 pKa = 11.06AMEE755 pKa = 4.44QLGSTYY761 pKa = 10.98DD762 pKa = 3.61SLAMRR767 pKa = 11.84ARR769 pKa = 11.84LLIDD773 pKa = 4.82DD774 pKa = 4.56VSDD777 pKa = 3.88DD778 pKa = 3.9AAMISCQLAKK788 pKa = 10.42DD789 pKa = 3.47IQYY792 pKa = 10.54VCDD795 pKa = 4.15TISNLAQYY803 pKa = 9.61GAQLTQKK810 pKa = 10.81SNDD813 pKa = 2.99ICEE816 pKa = 4.38CSQVQISKK824 pKa = 10.19RR825 pKa = 11.84RR826 pKa = 11.84LMAKK830 pKa = 9.73KK831 pKa = 9.44RR832 pKa = 11.84AKK834 pKa = 9.74LRR836 pKa = 11.84KK837 pKa = 9.1EE838 pKa = 3.79VDD840 pKa = 4.08FQPSQAINDD849 pKa = 3.61IVSTCRR855 pKa = 11.84GTVNQALRR863 pKa = 11.84MAEE866 pKa = 4.3SIPLRR871 pKa = 11.84TYY873 pKa = 9.37RR874 pKa = 11.84TEE876 pKa = 4.22SYY878 pKa = 8.41TAQYY882 pKa = 10.2PGDD885 pKa = 4.41PPPNGPSSDD894 pKa = 3.72QPDD897 pKa = 3.82KK898 pKa = 10.98KK899 pKa = 10.69RR900 pKa = 11.84KK901 pKa = 8.03LTEE904 pKa = 3.72EE905 pKa = 3.91KK906 pKa = 10.63LRR908 pKa = 11.84AGFAKK913 pKa = 10.47ALNATYY919 pKa = 10.27DD920 pKa = 3.59YY921 pKa = 11.53GILTKK926 pKa = 10.88LKK928 pKa = 10.42DD929 pKa = 3.61FHH931 pKa = 7.06NEE933 pKa = 3.32PKK935 pKa = 10.37TFLDD939 pKa = 3.63FDD941 pKa = 4.2KK942 pKa = 11.2VRR944 pKa = 11.84QTTSEE949 pKa = 4.2KK950 pKa = 11.04EE951 pKa = 3.82EE952 pKa = 4.72DD953 pKa = 3.45SDD955 pKa = 4.12FSKK958 pKa = 10.88SASSRR963 pKa = 11.84LGSPTTPTEE972 pKa = 4.16SVTPRR977 pKa = 11.84QFHH980 pKa = 5.43PTLRR984 pKa = 11.84SFSRR988 pKa = 11.84TTLGGSTHH996 pKa = 6.43PHH998 pKa = 5.11QMMEE1002 pKa = 4.28VEE1004 pKa = 5.1NMAEE1008 pKa = 4.06RR1009 pKa = 11.84YY1010 pKa = 7.55GTLSNYY1016 pKa = 9.37IPQLPPRR1023 pKa = 11.84LQKK1026 pKa = 10.54EE1027 pKa = 4.19FQTLLNGKK1035 pKa = 9.01HH1036 pKa = 5.76SEE1038 pKa = 3.8EE1039 pKa = 4.0SRR1041 pKa = 11.84YY1042 pKa = 9.99LRR1044 pKa = 11.84PEE1046 pKa = 3.71GLMRR1050 pKa = 11.84SCPTKK1055 pKa = 10.98LEE1057 pKa = 4.18ADD1059 pKa = 3.92SLRR1062 pKa = 11.84GLLVSLKK1069 pKa = 10.77DD1070 pKa = 3.51NAYY1073 pKa = 10.51LSQEE1077 pKa = 3.98LMSEE1081 pKa = 4.18LMRR1084 pKa = 11.84RR1085 pKa = 11.84SEE1087 pKa = 3.98NN1088 pKa = 3.36

Molecular weight:
122.23 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1580

492

1088

790.0

89.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.013 ± 0.167

2.405 ± 0.123

6.139 ± 0.127

5.696 ± 0.424

4.241 ± 0.436

5.443 ± 0.129

1.962 ± 0.247

5.0 ± 0.253

4.747 ± 0.143

10.127 ± 0.019

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.228 ± 0.434

3.797 ± 0.283

5.316 ± 0.089

3.291 ± 0.336

5.823 ± 0.49

8.608 ± 0.142

5.949 ± 0.556

7.089 ± 0.224

1.519 ± 0.477

3.608 ± 0.237

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski